RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 F13BP05160 661 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 ACHEP22303 614 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF133P52736 654 aaPredicted RBP9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 CRYBA2P53672 197 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 UGT2B15P54855 530 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 MRPS34P82930 218 aaKnown RBP9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 RIN1Q13671 783 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 MELKQ14680 651 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 PCGF3Q3KNV8 242 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 CYBRD1Q53TN4 286 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 HSP90B2PQ58FF3 399 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 FAM120AOSQ5T036 256 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 C10orf128Q5T292 105 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 FAM205BPQ63HN1 556 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 RGS7BPQ6MZT1 257 aaPredicted RBP9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF584Q8IVC4 421 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 NKAIN4Q8IVV8 208 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 RNF113BQ8IZP6 322 aaKnown RBP9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 LINC01356Q8N9X3 169 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 NOXO1Q8NFA2 376 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 OR4K5Q8NGD3 323 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF519Q8TB69 540 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 TMEM255BQ8WV15 326 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 SNX33Q8WV41 574 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 PRRC1Q96M27 445 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 RBP7Q96R05 134 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 SH3GL3Q99963 347 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 HOPXQ9BPY8 73 aaPredicted RBP9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 TXNIPQ9H3M7 391 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 DUSP13Q9UII6 198 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 CR1P17927 2039 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 DNHD1Q96M86 4753 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 PHF1O43189 567 aaPredicted RBP9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 CCDC22O60826 627 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 LILRA1O75019 489 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 TRMUO75648 421 aaKnown RBP9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 SASH3O75995 380 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 TSPAN19P0C672 248 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF250P15622 560 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 IGFBP5P24593 272 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 APEX1P27695 318 aaKnown RBP9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 APLNRP35414 380 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 AQP2P41181 271 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 TEKQ02763 1124 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 HSF2Q03933 536 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 NKPD1Q17RQ9 610 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 LRRC23Q53EV4 343 aaPredicted RBP9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ALG10Q5BKT4 473 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 FAM209AQ5JX71 171 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 THEM4Q5T1C6 240 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ARMC4Q5T2S8 1044 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 LIPNQ5VXI9 398 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 TSPYL5Q86VY4 417 aaPredicted RBP9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 WDFY1Q8IWB7 410 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 MICU2Q8IYU8 434 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ALDH16A1Q8IZ83 802 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZCCHC24Q8N2G6 241 aaKnown RBP9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 RBM15BQ8NDT2 890 aaKnown RBP9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 PFN4Q8NHR9 129 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 SYNPRQ8TBG9 265 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ASB10Q8WXI3 467 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 C1orf159Q96HA4 380 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 TPD52L3Q96J77 140 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF347Q96SE7 839 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 SYT3Q9BQG1 590 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 WACQ9BTA9 647 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ALG12Q9BV10 488 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 FNDC11Q9BVV2 318 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF416Q9BWM5 594 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 NDEL1Q9GZM8 345 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 CCDC134Q9H6E4 229 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 CCNB1IP1Q9NPC3 277 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 NKIRAS2Q9NYR9 191 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 EIF3KQ9UBQ5 218 aaKnown RBP9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 HIF3AQ9Y2N7 669 aa9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 ANK3Q12955 4377 aaKnown RBP9.35□□□□□ -0.91
VTI1BP3-201ENST00000550220 STAB1Q9NY15 2570 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 IGLV3-9A0A075B6K5 115 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 LRP5LA4QPB2 252 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 A6NIZ1 184 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 B4DSR2 109 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 IFNW1P05000 195 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 LCKP06239 509 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 PATE4P0C8F1 98 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 ANPEPP15144 967 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 ALDH3B1P43353 468 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 GPR6P46095 362 aaPredicted RBP9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 OR1E2P47887 323 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 SLC9A3P48764 834 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 UCP2P55851 309 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 KLF3P57682 345 aaPredicted RBP9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 RAP1BP61224 184 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 PCBD1P61457 104 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 RAP1AP62834 184 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 SCGB2A2Q13296 93 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 TRAM2Q15035 370 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 FAM27BQ5VT28 67 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 TMEM154Q6P9G4 183 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 TEX29Q8N6K0 151 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 SYT14Q8NB59 555 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms