RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 SOCS2O14508 198 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 ARPC3O15145 178 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 IDH3BO43837 385 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 SLC2A10O95528 541 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 PPP1R3DO95685 299 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 OR8G3PP0DMU2 310 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 CBR1P16152 277 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 CD40P25942 277 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 FMODQ06828 376 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 COX10Q12887 443 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 C3orf36Q3SXR2 165 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 MESTQ5EB52 335 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 CD300LDQ6UXZ3 194 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 ADCK1Q86TW2 530 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 CLDN22Q8N7P3 220 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 OR52L1Q8NGH7 329 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 NRGNQ92686 78 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 IFT27Q9BW83 186 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 EGLN3Q9H6Z9 239 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 NTN4Q9HB63 628 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 B3GNT2Q9NY97 397 aa16.89■□□□□ 0.29
DDX54-207ENST00000550016 CRNNQ9UBG3 495 aaPredicted RBP16.89■□□□□ 0.29
DDX54-207ENST00000550016 IGKV1D-43A0A0B4J1Z2 117 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 MGRN1O60291 552 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 FARS2O95363 451 aaKnown RBP16.88■□□□□ 0.29
DDX54-207ENST00000550016 CD79AP11912 226 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 CAPZA2P47755 286 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 ARHGDIAP52565 204 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 ACTR3P61158 418 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 NRN1LQ496H8 165 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 SKA3Q8IX90 412 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 NANOS1Q8WY41 292 aaKnown RBP16.88■□□□□ 0.29
DDX54-207ENST00000550016 NSMAFQ92636 917 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 NRBF2Q96F24 287 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 RADILQ96JH8 1075 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 SLC38A2Q96QD8 506 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 RAB3IPQ96QF0 476 aaPredicted RBP16.88■□□□□ 0.29
DDX54-207ENST00000550016 LIME1Q9H400 295 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 UGT2A1Q9Y4X1 527 aa16.88■□□□□ 0.29
DDX54-207ENST00000550016 ZNF503-AS2A6NEH8 195 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 H7C1C5 153 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 ABCD4O14678 606 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 HLA-HP01893 362 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 FCGR1AP12314 374 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 NPR2P20594 1047 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 FASP25445 335 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 ARR3P36575 388 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 CDKN2AP42771 156 aaKnown RBP16.87■□□□□ 0.29
DDX54-207ENST00000550016 LCN6P62502 163 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 MRPS34P82930 218 aaKnown RBP16.87■□□□□ 0.29
DDX54-207ENST00000550016 KPNB1Q14974 876 aaKnown RBP16.87■□□□□ 0.29
DDX54-207ENST00000550016 ATP6AP1Q15904 470 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 GSG1Q2KHT4 349 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 ADAM5Q6NVV9 412 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 SHQ1Q6PI26 577 aaKnown RBP16.87■□□□□ 0.29
DDX54-207ENST00000550016 CDH24Q86UP0 819 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 MDP1Q86V88 176 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 SH3GL3Q99963 347 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 NIPSNAP1Q9BPW8 284 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 BDH2Q9BUT1 245 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 DENND2DQ9H6A0 471 aaPredicted RBP16.87■□□□□ 0.29
DDX54-207ENST00000550016 UBTD1Q9HAC8 227 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 ZNF224Q9NZL3 707 aa16.87■□□□□ 0.29
DDX54-207ENST00000550016 VSX1Q9NZR4 365 aaPredicted RBP16.87■□□□□ 0.29
DDX54-207ENST00000550016 TEX15Q9BXT5 2789 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 IGHV1-18A0A0C4DH31 117 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 HS3ST1O14792 307 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 UBL3O95164 117 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 IGKV3-15P01624 115 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 IGLV1-44P01699 117 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 ANXA8P13928 327 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 PRKACGP22612 351 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 NOS3P29474 1203 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 CDAP32320 146 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 GUCA1AP43080 201 aaPredicted RBP16.86■□□□□ 0.29
DDX54-207ENST00000550016 PIGFQ07326 219 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 SGCAQ16586 387 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 CLEC12AQ5QGZ9 265 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 PTCHD4Q6ZW05 846 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 DPPA2Q7Z7J5 298 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 C10orf67Q8IYJ2 551 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 HS3ST5Q8IZT8 346 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 DEPDC4Q8N2C3 294 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
DDX54-207ENST00000550016 OR5K1Q8NHB7 308 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 LILRB1Q8NHL6 650 aaPredicted RBP16.86■□□□□ 0.29
DDX54-207ENST00000550016 AKAP1Q92667 903 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDX54-207ENST00000550016 PLA2G12AQ9BZM1 189 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 ZNF556Q9HAH1 456 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 SIAEQ9HAT2 523 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 TBC1D23Q9NUY8 699 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 ST6GALNAC2Q9UJ37 374 aa16.86■□□□□ 0.29
DDX54-207ENST00000550016 RTTNQ86VV8 2226 aa16.85■□□□□ 0.29
DDX54-207ENST00000550016 SHISA9B4DS77 424 aa16.85■□□□□ 0.29
DDX54-207ENST00000550016 BHLHE40O14503 412 aa16.85■□□□□ 0.29
DDX54-207ENST00000550016 SOX14O95416 240 aa16.85■□□□□ 0.29
DDX54-207ENST00000550016 TP53P04637 393 aaPredicted RBP16.85■□□□□ 0.29
DDX54-207ENST00000550016 IGFBP1P08833 259 aaPredicted RBP16.85■□□□□ 0.29
DDX54-207ENST00000550016 HIST1H1CP16403 213 aaKnown RBP16.85■□□□□ 0.29
DDX54-207ENST00000550016 RAB1AP62820 205 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms