RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 IVLP07476 585 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 UBTFL1P0CB47 393 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 ABOP16442 354 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 SRMP19623 302 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 EIF2S2P20042 333 aaKnown RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 TBPP20226 339 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 GTF2E2P29084 291 aaKnown RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 HMOX2P30519 316 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 BMI1P35226 326 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 NAA10P41227 235 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 NSG1P42857 185 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 UQCRFS1P47985 274 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 TFPI2P48307 235 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 MRPL19P49406 292 aaKnown RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 CCNHP51946 323 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 CLDN18P56856 261 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 FBXW4P57775 412 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 YWHAGP61981 247 aaKnown RBP eCLIP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 RAB11AP62491 216 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 LIPEQ05469 1076 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 ITIH4Q14624 930 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 RAB11BQ15907 218 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 MRPL23Q16540 153 aaKnown RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 PARP15Q460N3 678 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 BEX5Q5H9J7 111 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 SAMD4BQ5PRF9 694 aaKnown RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 GPRC6AQ5T6X5 926 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 GPR157Q5UAW9 335 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 C11orf71Q6IPW1 123 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 WDR74Q6RFH5 385 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 Q6ZSR3 168 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 ACOT7LQ6ZUV0 252 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 SLC16A14Q7RTX9 510 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 MMAAQ8IVH4 418 aaKnown RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 NRMQ8IXM6 262 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 PDCL2Q8N4E4 241 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 OR8K3Q8NH51 312 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 DTX3LQ8TDB6 740 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 PIBF1Q8WXW3 757 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 RPUSD4Q96CM3 377 aaKnown RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 C19orf60Q96EN9 201 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 SH3GL1Q99961 368 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 KLHDC3Q9BQ90 382 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 MRPL45Q9BRJ2 306 aaKnown RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 IL22Q9GZX6 179 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 CYP3A43Q9HB55 503 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 FOLH1BQ9HBA9 442 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 TMEM165Q9HC07 324 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 LYRM4Q9HD34 91 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 TBX21Q9UL17 535 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 TRAF3IP3Q9Y228 551 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 COMMD3-BMI1R4GMX3 469 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 CDHR2Q9BYE9 1310 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 IGKV1D-17A0A075B6S4 117 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 KCNE1BA0A087WTH5 132 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 IGHV1OR21-1A0A087WYE8 117 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 KBTBD11-OT1A0A1B0GTJ5 212 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 M0QX08 132 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 CCL21O00585 134 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 DYNC1I1O14576 645 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 GOSR2O14653 212 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 AIM2O14862 343 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 RAB29O14966 203 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 EIF3HO15372 352 aaKnown RBP eCLIP2.11□□□□□ -2.07
CCDC38-208ENST00000549876 CHMP2AO43633 222 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 HUS1O60921 280 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 MED6O75586 246 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 ERLIN2O94905 339 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 TSPAN13O95857 204 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 IGHV2-5P01817 119 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 ALDOBP05062 364 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 MYL2P10916 166 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 U2AF2P26368 475 aaKnown RBP eCLIP2.11□□□□□ -2.07
CCDC38-208ENST00000549876 CX3CR1P49238 355 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 TMED10P49755 219 aaKnown RBP2.11□□□□□ -2.07
CCDC38-208ENST00000549876 BIDP55957 195 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 GPX6P59796 221 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 ILKQ13418 452 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 NSDHLQ15738 373 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 NSUN5P1Q3KNT7 163 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 FBXO48Q5FWF7 155 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 LY6G6FQ5SQ64 297 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 REEP3Q6NUK4 255 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 ARCQ7LC44 396 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 VTCN1Q7Z7D3 282 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 LINC00523Q86TU6 105 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 PLA2G4DQ86XP0 818 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 IQCKQ8N0W5 287 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 FTMTQ8N4E7 242 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 MS4A15Q8N5U1 240 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 FNDC5Q8NAU1 212 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 OR9G4Q8NGQ1 327 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 RHEBL1Q8TAI7 183 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 MITD1Q8WV92 249 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 ZNF707Q96C28 371 aaPredicted RBP2.11□□□□□ -2.07
CCDC38-208ENST00000549876 CCDC126Q96EE4 140 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 FAM210BQ96KR6 192 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 PGLYRP4Q96LB8 373 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 OR8B4Q96RC9 309 aa2.11□□□□□ -2.07
CCDC38-208ENST00000549876 ATP5SQ99766 215 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms