RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CALCRP30988 508 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 TTKP33981 857 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 RAP1BP61224 184 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 RAB1AP62820 205 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 RAP1AP62834 184 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 ADAM8P78325 824 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 SLC25A47Q6Q0C1 308 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 THSD4Q6ZMP0 1018 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 FAM122BQ7Z309 247 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 DTX2Q86UW9 622 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 KRTAP1-3Q8IUG1 177 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 FGFBP3Q8TAT2 258 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 NSMAFQ92636 917 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 Q96M85 177 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 ZNF75AQ96N20 296 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 RBP7Q96R05 134 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 SH3GL3Q99963 347 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 TRAF4Q9BUZ4 470 aaPredicted RBP16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 GSX2Q9BZM3 304 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 TRIM15Q9C019 465 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 SMURF2Q9HAU4 748 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 ZNF701Q9NV72 531 aaPredicted RBP16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 UGT2A1Q9Y4X1 527 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 HIVEP1P15822 2718 aa16.27■□□□□ 0.19
PRPF40B-206ENST00000547764 AQP12BA6NM10 295 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 OVOL3O00110 214 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 GSC2O15499 205 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 ARHGEF9O43307 516 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 ENTPD5O75356 428 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 UBL3O95164 117 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 FARS2O95363 451 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 NR2C1P13056 603 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 PAX1P15863 534 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 FPR3P25089 353 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 CDAP32320 146 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 IFNGR2P38484 337 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 GIPRP48546 466 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 PTDSS1P48651 473 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 PTH2RP49190 550 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 FABP6P51161 128 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 NRN1LQ496H8 165 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 THEM4Q5T1C6 240 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 ZNF544Q6NX49 715 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 C1orf94Q6P1W5 598 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 AQP12AQ8IXF9 295 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 ADGRG5Q8IZF4 528 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 OR4C15Q8NGM1 316 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 FNDC8Q8TC99 324 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 MS4A3Q96HJ5 214 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 GPX7Q96SL4 187 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 CADM1Q9BY67 442 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 DENND2DQ9H6A0 471 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 NRIP3Q9NQ35 241 aa16.26■□□□□ 0.19
PRPF40B-206ENST00000547764 H7C1C5 153 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 RAB36O95755 333 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 RAP2AP10114 183 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 ZNF14P17017 642 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 GSSP48637 474 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 LCN6P62502 163 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 MRPS34P82930 218 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 PPP1R8Q12972 351 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 MESTQ5EB52 335 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 AGAP6Q5VW22 663 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 SHEQ5VZ18 495 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 OR2T5Q6IEZ7 315 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 PGBD2Q6P3X8 592 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 SMARCD3Q6STE5 483 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 DPY19L2P2Q6ZN68 376 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 TGIF2LYQ8IUE0 185 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 FBXL14Q8N1E6 418 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 MUC15Q8N387 334 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 WFDC11Q8NEX6 87 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 OR2T29Q8NH02 315 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 GNPDA2Q8TDQ7 276 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 GTPBP3Q969Y2 492 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 ZNF570Q96NI8 536 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 GRIP2Q9C0E4 1043 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 VNN3Q9NY84 501 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 POMPQ9Y244 141 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 IER3IP1Q9Y5U9 82 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 VPS13CQ709C8 3753 aa16.25■□□□□ 0.19
PRPF40B-206ENST00000547764 IGHV2OR16-5A0A0B4J2B6 119 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 TEX13CA0A0J9YWL9 993 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 XKRYO14609 159 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 SDHAP31040 664 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 APOBEC3AP31941 199 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 CDKN1AP38936 164 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 HGFACQ04756 655 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 FLOT2Q14254 428 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 RFX4Q33E94 735 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 Q5PR19 223 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 GPR139Q6DWJ6 353 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 SLC16A14Q7RTX9 510 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 LRRC18Q8N456 261 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 LINC00471Q8N535 108 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 IL17RDQ8NFM7 739 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 OR9Q2Q8NGE9 314 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 FANK1Q8TC84 345 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 CANT1Q8WVQ1 401 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 NABP1Q96AH0 204 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms