RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 KRTAP10-9P60411 292 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 TLE4Q04727 773 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 RIPK1Q13546 671 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 HIST3H3Q16695 136 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 CEACAM16Q2WEN9 425 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 C10orf128Q5T292 105 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 NHLRC1Q6VVB1 395 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 STAC2Q6ZMT1 411 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 CDH24Q86UP0 819 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 HSD17B8Q92506 261 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 MCHR2Q969V1 340 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 BOD1Q96IK1 185 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 DACH2Q96NX9 599 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 FOXB1Q99853 325 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 WACQ9BTA9 647 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 ACTR6Q9GZN1 396 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 RNPEPL1Q9HAU8 725 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 VSX1Q9NZR4 365 aaPredicted RBP12.19□□□□□ -0.46
TSEN54-203ENST00000545228 REV1Q9UBZ9 1251 aa12.19□□□□□ -0.46
TSEN54-203ENST00000545228 PKDREJQ9NTG1 2253 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 PDLIM1O00151 329 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 KHDRBS3O75525 346 aaKnown RBP12.18□□□□□ -0.46
TSEN54-203ENST00000545228 UPK3AO75631 287 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 RAD51DO75771 328 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 LYZL6O75951 148 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 KIR2DL3P43628 341 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 GIPRP48546 466 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 ZNF133P52736 654 aaPredicted RBP12.18□□□□□ -0.46
TSEN54-203ENST00000545228 FXYD6P3P58550 94 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 CDC42P60953 191 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 GLO1Q04760 184 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 SLC34A1Q06495 639 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.18□□□□□ -0.46
TSEN54-203ENST00000545228 LGALS3BPQ08380 585 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 MESTQ5EB52 335 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 LEG1Q6P5S2 330 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 MEX3BQ6ZN04 569 aaKnown RBP12.18□□□□□ -0.46
TSEN54-203ENST00000545228 ZNF627Q7L945 461 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.18□□□□□ -0.46
TSEN54-203ENST00000545228 CBR4Q8N4T8 237 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 SYT14Q8NB59 555 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 ACBD4Q8NC06 268 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 OR52E2Q8NGJ4 325 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 OR2T4Q8NH00 348 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 FAM222BQ8WU58 562 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 HDAC2Q92769 488 aaKnown RBP12.18□□□□□ -0.46
TSEN54-203ENST00000545228 RASD2Q96D21 266 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 GABARAPL3Q9BY60 117 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 CMC2Q9NRP2 79 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 FKBP7Q9Y680 259 aa12.18□□□□□ -0.46
TSEN54-203ENST00000545228 SLC22A23A1A5C7 686 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 SH3D21A4FU49 640 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 OR5H1A6NKK0 313 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 CASQ2O14958 399 aaPredicted RBP12.17□□□□□ -0.46
TSEN54-203ENST00000545228 UBL3O95164 117 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 ITGA5P08648 1049 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 OR8G3PP0DMU2 310 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 HIST1H1CP16403 213 aaKnown RBP12.17□□□□□ -0.46
TSEN54-203ENST00000545228 ZNF26P17031 533 aaPredicted RBP12.17□□□□□ -0.46
TSEN54-203ENST00000545228 NTF4P34130 210 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 CDK5Q00535 292 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 FAM27E3Q08E93 113 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 NPRL3Q12980 569 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 GINS1Q14691 196 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 TESK1Q15569 626 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 SPNS3Q6ZMD2 512 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 ZNF813Q6ZN06 617 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 DMRTC2Q8IXT2 367 aaPredicted RBP12.17□□□□□ -0.46
TSEN54-203ENST00000545228 ZNF555Q8NEP9 628 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 OR1K1Q8NGR3 316 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 MUS81Q96NY9 551 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 PLA2G12AQ9BZM1 189 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 RACGAP1Q9H0H5 632 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 SYT4Q9H2B2 425 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 NELFAQ9H3P2 528 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 FN3KQ9H479 309 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 RIBC2Q9H4K1 309 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 KCNN3Q9UGI6 736 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 RRP15Q9Y3B9 282 aaKnown RBP12.17□□□□□ -0.46
TSEN54-203ENST00000545228 ALPK2Q86TB3 2170 aa12.17□□□□□ -0.46
TSEN54-203ENST00000545228 F8P00451 2351 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 ANKRD17O75179 2603 aaKnown RBP12.16□□□□□ -0.46
TSEN54-203ENST00000545228 ARPC4-TTLL3A0A0A6YYG9 625 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 PRR23D1E9PI22 279 aaPredicted RBP12.16□□□□□ -0.46
TSEN54-203ENST00000545228 PTHP01270 115 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 PRR23D2P0DMB1 279 aaPredicted RBP12.16□□□□□ -0.46
TSEN54-203ENST00000545228 NR1H2P55055 460 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 PCBD1P61457 104 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 MRPS34P82930 218 aaKnown RBP12.16□□□□□ -0.46
TSEN54-203ENST00000545228 PPA1Q15181 289 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 PTGES3Q15185 160 aaKnown RBP12.16□□□□□ -0.46
TSEN54-203ENST00000545228 GABRA6Q16445 453 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 SNAPC1Q16533 368 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 SLC36A2Q495M3 483 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 SLC35F1Q5T1Q4 408 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 GLB1L2Q8IW92 636 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 DEPDC4Q8N2C3 294 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 SDR9C7Q8NEX9 313 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 OR10H5Q8NGA6 315 aa12.16□□□□□ -0.46
TSEN54-203ENST00000545228 OR8D4Q8NGM9 314 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms