RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 NIPAL2Q9H841 368 aa1.53□□□□□ -2.16
CCDC170-203ENST00000544131 LRRC40Q9H9A6 602 aa1.53□□□□□ -2.16
CCDC170-203ENST00000544131 NMRAL1Q9HBL8 299 aa1.53□□□□□ -2.16
CCDC170-203ENST00000544131 SGK2Q9HBY8 427 aa1.53□□□□□ -2.16
CCDC170-203ENST00000544131 YEATS2Q9ULM3 1422 aa1.53□□□□□ -2.16
CCDC170-203ENST00000544131 PACSIN2Q9UNF0 486 aaPredicted RBP1.53□□□□□ -2.16
CCDC170-203ENST00000544131 F11RQ9Y624 299 aaKnown RBP1.53□□□□□ -2.16
CCDC170-203ENST00000544131 SHANK1Q9Y566 2161 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 IGLV3-12A0A075B6K2 115 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 CIB4A0PJX0 185 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 CLRN2A0PK11 232 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 BTBD17A6NE02 478 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 K7EM74 188 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 HAS3O00219 553 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 RBFOX2O43251 390 aaKnown RBP eCLIP1.52□□□□□ -2.17
CCDC170-203ENST00000544131 OR7A10O76100 309 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 ZDHHC11BP0C7U3 371 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 LINC00869P0C866 280 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 IGHV3-43DP0DP04 118 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 ATP5C1P36542 298 aaKnown RBP1.52□□□□□ -2.17
CCDC170-203ENST00000544131 NPBWR2P48146 333 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 ACTR1AP61163 376 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 RAP1AP62834 184 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 CHIT1Q13231 466 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 ARHGAP19Q14CB8 494 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 KCTD21Q4G0X4 260 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 VAX1Q5SQQ9 334 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 RAET1LQ5VY80 246 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 CASC1Q6TDU7 716 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 RGS9BPQ6ZS82 235 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 RIMKLAQ8IXN7 391 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 OSR2Q8N2R0 312 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 ZNF557Q8N988 423 aaPredicted RBP1.52□□□□□ -2.17
CCDC170-203ENST00000544131 EIF1ADQ8N9N8 165 aaKnown RBP1.52□□□□□ -2.17
CCDC170-203ENST00000544131 BHLHE23Q8NDY6 225 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 RGP1Q92546 391 aaPredicted RBP1.52□□□□□ -2.17
CCDC170-203ENST00000544131 SGK3Q96BR1 496 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 LRRC58Q96CX6 371 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 PLEKHA8Q96JA3 519 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 KCTD14Q9BQ13 255 aaPredicted RBP1.52□□□□□ -2.17
CCDC170-203ENST00000544131 CRACR2AQ9BSW2 395 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 FAIM2Q9BWQ8 316 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 OSBPL10Q9BXB5 764 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 GABARAPL3Q9BY60 117 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 CD84Q9UIB8 345 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 TMCC3Q9ULS5 477 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 NPTNQ9Y639 398 aa1.52□□□□□ -2.17
CCDC170-203ENST00000544131 CDHR2Q9BYE9 1310 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 IGKV1D-13A0A0B4J2D9 117 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 A0A1B0GVI7 797 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 CCL21O00585 134 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 DYNC1I1O14576 645 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 SURF6O75683 361 aaKnown RBP1.51□□□□□ -2.17
CCDC170-203ENST00000544131 IGHV2-5P01817 119 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 GAPDHP04406 335 aaKnown RBP1.51□□□□□ -2.17
CCDC170-203ENST00000544131 C2P06681 752 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 SMIM10L1P0DMW3 83 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 IGKV1-13P0DP09 117 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 YAP1P46937 504 aaKnown RBP1.51□□□□□ -2.17
CCDC170-203ENST00000544131 CCR8P51685 355 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 ARFIP1P53367 373 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 UGT2B15P54855 530 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 SEC61GP60059 68 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 RPS21P63220 83 aaKnown RBP1.51□□□□□ -2.17
CCDC170-203ENST00000544131 SYCNQ0VAF6 134 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 PRPSAP1Q14558 356 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 TTLL9Q3SXZ7 439 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 H2BFWTQ7Z2G1 175 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 PEX26Q7Z412 305 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 TBC1D21Q8IYX1 336 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 PUSL1Q8N0Z8 303 aaKnown RBP1.51□□□□□ -2.17
CCDC170-203ENST00000544131 ZCCHC7Q8N3Z6 543 aaKnown RBP1.51□□□□□ -2.17
CCDC170-203ENST00000544131 MREGQ8N565 214 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 SMIM10Q96HG1 83 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 TSSK3Q96PN8 268 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 ZBTB18Q99592 522 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 RARRES2Q99969 163 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 TMEM59Q9BXS4 323 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 GON7Q9BXV9 100 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 ANKRD19PQ9H560 264 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 ZNRD1Q9P1U0 126 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 ZNF229Q9UJW7 825 aa1.51□□□□□ -2.17
CCDC170-203ENST00000544131 GPATCH8Q9UKJ3 1502 aaKnown RBP1.5□□□□□ -2.17
CCDC170-203ENST00000544131 KANK1Q14678 1352 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 OR52A4PA6NMU1 304 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 KMOO15229 486 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 PSTPIP1O43586 416 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 SOX15O60248 233 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 ATP1B2P14415 290 aaPredicted RBP1.5□□□□□ -2.17
CCDC170-203ENST00000544131 ETS2P15036 469 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 AK4P27144 223 aaPredicted RBP1.5□□□□□ -2.17
CCDC170-203ENST00000544131 VHLP40337 213 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 CYB561P49447 251 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 RORCP51449 518 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 NCBP2P52298 156 aaKnown RBP eCLIP1.5□□□□□ -2.17
CCDC170-203ENST00000544131 CDH4P55283 916 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 FBXW4P57775 412 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 ZMYND11Q15326 602 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 ZNF77Q15935 545 aa1.5□□□□□ -2.17
CCDC170-203ENST00000544131 C6orf226Q5I0X4 101 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms