RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SLC25A15Q9Y619 301 aa13.58□□□□□ -0.24
DDB1-218ENST00000540784 ALPK2Q86TB3 2170 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 SLC16A7O60669 478 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 SEC14L2O76054 403 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 OR8G3PP0DMU2 310 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 PAX7P23759 505 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 FMODQ06828 376 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 KDM4DQ6B0I6 523 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 SLC27A4Q6P1M0 643 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 LEG1Q6P5S2 330 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 PTCHD4Q6ZW05 846 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 ZNF771Q7L3S4 317 aaPredicted RBP13.57□□□□□ -0.24
DDB1-218ENST00000540784 ZNF627Q7L945 461 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 ZNF295-AS1Q8N0V1 137 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 OR4Q3Q8NH05 313 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 NMNAT3Q96T66 252 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 RBM4BQ9BQ04 359 aaKnown RBP13.57□□□□□ -0.24
DDB1-218ENST00000540784 RBM4Q9BWF3 364 aaKnown RBP13.57□□□□□ -0.24
DDB1-218ENST00000540784 C1QTNF6Q9BXI9 259 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 TEX12Q9BXU0 123 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 RERGLQ9H628 205 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 SEC61A2Q9H9S3 476 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 SRA1Q9HD15 236 aaKnown RBP13.57□□□□□ -0.24
DDB1-218ENST00000540784 OBP2BQ9NPH6 170 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 TMEM38BQ9NVV0 291 aa13.57□□□□□ -0.24
DDB1-218ENST00000540784 ARPC4-TTLL3A0A0A6YYG9 625 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 IGKV1D-43A0A0B4J1Z2 117 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 A6NNC1 897 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 MGRN1O60291 552 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 KHDRBS3O75525 346 aaKnown RBP13.56□□□□□ -0.24
DDB1-218ENST00000540784 FARS2O95363 451 aaKnown RBP13.56□□□□□ -0.24
DDB1-218ENST00000540784 IFNGP01579 166 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 HMGN1P05114 100 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 B4GALT1P15291 398 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 NPR2P20594 1047 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 CRABP1P29762 137 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 SSTR2P30874 369 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 CAPZA2P47755 286 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 CRISP1P54107 249 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 ESRRGP62508 458 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDB1-218ENST00000540784 SGCAQ16586 387 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 FBXW10Q5XX13 1052 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 PARP8Q8N3A8 854 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 SLC22A24Q8N4F4 322 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 C14orf79Q96F83 325 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 SNX18Q96RF0 628 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 CIB1Q99828 191 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 NUAK2Q9H093 628 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 SYT4Q9H2B2 425 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 NELFAQ9H3P2 528 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 SIAEQ9HAT2 523 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 KLHL21Q9UJP4 597 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 UGT2A1Q9Y4X1 527 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 ADGRG4Q8IZF6 3080 aa13.56□□□□□ -0.24
DDB1-218ENST00000540784 MITFO75030 526 aaPredicted RBP13.55□□□□□ -0.24
DDB1-218ENST00000540784 GOSR1O95249 250 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 CD79AP11912 226 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 ANPEPP15144 967 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 IGFBP5P24593 272 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 CDAP32320 146 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 GRK5P34947 590 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 ZNF83P51522 516 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 ELF3P78545 371 aaPredicted RBP13.55□□□□□ -0.24
DDB1-218ENST00000540784 MRPS34P82930 218 aaKnown RBP13.55□□□□□ -0.24
DDB1-218ENST00000540784 CDK5Q00535 292 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 TLE4Q04727 773 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 ETFDHQ16134 617 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 PGGHGQ32M88 737 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 NRN1LQ496H8 165 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 BEX5Q5H9J7 111 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 ZNF362Q5T0B9 420 aaPredicted RBP13.55□□□□□ -0.24
DDB1-218ENST00000540784 ACSM5Q6NUN0 579 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 DNM1P34Q6PK57 102 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 SKA3Q8IX90 412 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 IQCF1Q8N6M8 205 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 NPEPL1Q8NDH3 523 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 SDR9C7Q8NEX9 313 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 PIK3IP1Q96FE7 263 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 SH3GL3Q99963 347 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 C9orf16Q9BUW7 83 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 KCNN2Q9H2S1 579 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 ESRP2Q9H6T0 727 aaKnown RBP13.55□□□□□ -0.24
DDB1-218ENST00000540784 ENOPH1Q9UHY7 261 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 B9D1Q9UPM9 204 aa13.55□□□□□ -0.24
DDB1-218ENST00000540784 A0A1W2PPL8 197 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 OR6C68A6NDL8 312 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 RIIAD1A6NNX1 92 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 CTAG2O75638 210 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 HLA-HP01893 362 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 CTLA4P16410 223 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 CENPAP49450 140 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 TUBA1BP68363 451 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 TUBA4AP68366 448 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 PPP2R2BQ00005 443 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 PIGFQ07326 219 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 DAG1Q14118 895 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 PTGES3Q15185 160 aaKnown RBP13.54□□□□□ -0.24
DDB1-218ENST00000540784 RCN1Q15293 331 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 TMEM236Q5W0B7 351 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms