RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 C1orf198Q9H425 327 aa18.05■□□□□ 0.48
CHFR-217ENST00000540537 RNF121Q9H920 327 aa18.05■□□□□ 0.48
CHFR-217ENST00000540537 GMPR2Q9P2T1 348 aaKnown RBP18.05■□□□□ 0.48
CHFR-217ENST00000540537 FBN1P35555 2871 aaKnown RBP18.05■□□□□ 0.48
CHFR-217ENST00000540537 M0R233 179 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 CXCR6O00574 342 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 IFNA2P01563 188 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 IFNW1P05000 195 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 NR2C1P13056 603 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 APEHP13798 732 aaKnown RBP18.04■□□□□ 0.48
CHFR-217ENST00000540537 ZNF23P17027 643 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 TAF11Q15544 211 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 VTCN1Q7Z7D3 282 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 ZNF786Q8N393 782 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 SLC30A7Q8NEW0 376 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 UBASH3BQ8TF42 649 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 GEMIN6Q8WXD5 167 aaKnown RBP18.04■□□□□ 0.48
CHFR-217ENST00000540537 BPIFA2Q96DR5 249 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 SYT3Q9BQG1 590 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 EFCAB1Q9HAE3 211 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 SMURF2Q9HAU4 748 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 REV1Q9UBZ9 1251 aa18.04■□□□□ 0.48
CHFR-217ENST00000540537 SLC22A23A1A5C7 686 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 NME4O00746 187 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 NDUFAB1O14561 156 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 PTHP01270 115 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 IFI30P13284 250 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 LAPTM4AQ15012 233 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 TRAM2Q15035 370 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 ALG10Q5BKT4 473 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 PODNL1Q6PEZ8 512 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 HACD2Q6Y1H2 254 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 CBLL1Q75N03 491 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 NMD3Q96D46 503 aaKnown RBP18.03■□□□□ 0.48
CHFR-217ENST00000540537 FNDC11Q9BVV2 318 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 TPK1Q9H3S4 243 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 MS4A5Q9H3V2 200 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 CDH20Q9HBT6 801 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 MAN2C1Q9NTJ4 1040 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 LPAR3Q9UBY5 353 aa18.03■□□□□ 0.48
CHFR-217ENST00000540537 CUBNO60494 3623 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 GMNCA6NCL1 334 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 GSTA4O15217 222 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 LMX1BO60663 402 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 SNAP29O95721 258 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 ZNF682O95780 498 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 IGHMP01871 453 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 FAM157CP0CG43 387 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 MRPS34P82930 218 aaKnown RBP18.02■□□□□ 0.48
CHFR-217ENST00000540537 PLP2Q04941 152 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 IFI44LQ53G44 452 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 FAM166AQ6J272 317 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 TREML1Q86YW5 311 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 RBM15BQ8NDT2 890 aaKnown RBP18.02■□□□□ 0.48
CHFR-217ENST00000540537 OR1J2Q8NGS2 313 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 HDAC2Q92769 488 aaKnown RBP18.02■□□□□ 0.48
CHFR-217ENST00000540537 ALG12Q9BV10 488 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 SIAEQ9HAT2 523 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 SNX13Q9Y5W8 968 aa18.02■□□□□ 0.48
CHFR-217ENST00000540537 MXRA5Q9NR99 2828 aa18.02■□□□□ 0.47
CHFR-217ENST00000540537 LOC100289279A0A1B0GTE1 492 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 FFAR1O14842 300 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 SLC2A10O95528 541 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 MMP7P09237 267 aaPredicted RBP18.01■□□□□ 0.47
CHFR-217ENST00000540537 TACSTD2P09758 323 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 MAKP20794 623 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 YAP1P46937 504 aaKnown RBP18.01■□□□□ 0.47
CHFR-217ENST00000540537 GSK3BP49841 420 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 RPL27P61353 136 aaKnown RBP18.01■□□□□ 0.47
CHFR-217ENST00000540537 CD47Q08722 323 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 TBC1D28Q2M2D7 210 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 ANKDD1AQ495B1 522 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 FAM205BPQ63HN1 556 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 RGS7BPQ6MZT1 257 aaPredicted RBP18.01■□□□□ 0.47
CHFR-217ENST00000540537 LRP11Q86VZ4 500 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 NRMQ8IXM6 262 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 RNF113BQ8IZP6 322 aaKnown RBP18.01■□□□□ 0.47
CHFR-217ENST00000540537 MSI2Q96DH6 328 aaKnown RBP18.01■□□□□ 0.47
CHFR-217ENST00000540537 HSH2DQ96JZ2 352 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 LRMDAQ9H2I8 198 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 KCNN2Q9H2S1 579 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 MYEF2Q9P2K5 600 aaKnown RBP18.01■□□□□ 0.47
CHFR-217ENST00000540537 RHCGQ9UBD6 479 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 KCNS2Q9ULS6 477 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 UGT2A1Q9Y4X1 527 aa18.01■□□□□ 0.47
CHFR-217ENST00000540537 IQCMA0A1B0GVH7 501 aa18■□□□□ 0.47
CHFR-217ENST00000540537 J3KTA2 159 aa18■□□□□ 0.47
CHFR-217ENST00000540537 SAGP10523 405 aaPredicted RBP18■□□□□ 0.47
CHFR-217ENST00000540537 FUT4P22083 530 aa18■□□□□ 0.47
CHFR-217ENST00000540537 ALDH3B1P43353 468 aa18■□□□□ 0.47
CHFR-217ENST00000540537 NUDT2P50583 147 aa18■□□□□ 0.47
CHFR-217ENST00000540537 CHN2P52757 468 aa18■□□□□ 0.47
CHFR-217ENST00000540537 PRKCDQ05655 676 aa18■□□□□ 0.47
CHFR-217ENST00000540537 TOP3AQ13472 1001 aaPredicted RBP18■□□□□ 0.47
CHFR-217ENST00000540537 RIN1Q13671 783 aa18■□□□□ 0.47
CHFR-217ENST00000540537 SLC25A47Q6Q0C1 308 aa18■□□□□ 0.47
CHFR-217ENST00000540537 CXXC5Q7LFL8 322 aaKnown RBP18■□□□□ 0.47
CHFR-217ENST00000540537 LRRC18Q8N456 261 aa18■□□□□ 0.47
CHFR-217ENST00000540537 PAQR4Q8N4S7 273 aaPredicted RBP18■□□□□ 0.47
CHFR-217ENST00000540537 LRRC75AQ8NAA5 344 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms