RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MEDAGQ5VYS4 303 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 SLC25A47Q6Q0C1 308 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 LINGO2Q7L985 606 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 BTLAQ7Z6A9 289 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 OR51L1Q8NGJ5 315 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 STARD4Q96DR4 205 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CLN6Q9NWW5 311 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 PRSS50Q9UI38 385 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 B9D1Q9UPM9 204 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 FKBP7Q9Y680 259 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 DOPEY1Q5JWR5 2465 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 IGLV1-36A0A0B4J1U3 117 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 A0A0G2JNJ9 132 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 FAM171A2A8MVW0 826 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 AGFG2O95081 481 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CTSSP25774 331 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 NUDT6P53370 316 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 TEKQ02763 1124 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 APOFQ13790 326 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 KLHL12Q53G59 568 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 C6orf141Q5SZD1 244 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 TFAP2EQ6VUC0 442 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 B3GLCTQ6Y288 498 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZBTB46Q86UZ6 589 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 GPR137CQ8N3F9 429 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 OR2T4Q8NH00 348 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 FNDC8Q8TC99 324 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ALKBH3Q96Q83 286 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ULBP2Q9BZM5 246 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 LINC00470Q9BZP3 86 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 AMBNQ9NP70 447 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 H2AFY2Q9P0M6 372 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 Q9UFV3 132 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 LRCH1Q9Y2L9 728 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CCDC182A6NF36 153 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CCL21O00585 134 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 PRODHO43272 600 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CGAP01215 116 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 RNF224P0DH78 156 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 NR2C1P13056 603 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CRABP1P29762 137 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZNF133P52736 654 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CDH11P55287 796 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 LINC01590Q5TEZ4 76 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 TMEM211Q6ICI0 200 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 MEPCEQ7L2J0 689 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 POMGNT2Q8NAT1 580 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 NSMAFQ92636 917 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZNF837Q96EG3 531 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 Q96MT0 163 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 PSMG3-AS1Q96PY0 264 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 RACGAP1Q9H0H5 632 aa16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 COA3Q9Y2R0 106 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-213ENST00000540022 PCNX1Q96RV3 2341 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 OR6C65A6NJZ3 312 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 DHHO43323 396 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 RPS7P62081 194 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 C10orf128Q5T292 105 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 DNM1P34Q6PK57 102 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 LYPD4Q6UWN0 246 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 FJX1Q86VR8 437 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 GID4Q8IVV7 300 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 PROKR2Q8NFJ6 384 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 RND1Q92730 232 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 KISS1RQ969F8 398 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 FOXN4Q96NZ1 517 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 TEAD3Q99594 435 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 SFXN3Q9BWM7 321 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CRLF2Q9HC73 371 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 PLSCR4Q9NRQ2 329 aa16.68■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ALPK2Q86TB3 2170 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 SH3D21A4FU49 640 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 HSPB2A8KAH6 182 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 LRRTM2O43300 516 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 XPNPEP2O43895 674 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 KHDRBS3O75525 346 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 KRT33AO76009 404 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 GLCEO94923 617 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 GPANK1O95872 356 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 HTR1FP30939 366 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 FOXG1P55316 489 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ROR2Q01974 943 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 HSPB2Q16082 182 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 SLC35D3Q5M8T2 416 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 FBXW9Q5XUX1 488 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 UBE2J2Q8N2K1 259 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 BPIFB6Q8NFQ5 453 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 RFKQ969G6 155 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 GPR35Q9HC97 309 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 B3GAT2Q9NPZ5 323 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 UPB1Q9UBR1 384 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 MALT1Q9UDY8 824 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ERRFI1Q9UJM3 462 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 PROCRQ9UNN8 238 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 NAV2Q8IVL1 2488 aa16.67■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CYSRT1A8MQ03 144 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 SMNDC1O75940 238 aaKnown RBP eCLIP16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 CENPAP49450 140 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 ZNF91Q05481 1191 aa16.66■□□□□ 0.26
TNFRSF1A-213ENST00000540022 FAPQ12884 760 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms