RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SLC2A10O95528 541 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 TSPAN19P0C672 248 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 FAM157BP0CG42 384 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 LYNX1P0DP58 116 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 TCN1P20061 433 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 CDAP32320 146 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 GZMKP49863 264 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 RPS23P62266 143 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 MAD2L1BPQ15013 274 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 SLC36A2Q495M3 483 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 UBASH3BQ8TF42 649 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 NSMAFQ92636 917 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 HDAC2Q92769 488 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 BPIFA2Q96DR5 249 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 FNDC11Q9BVV2 318 aa16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 MYEF2Q9P2K5 600 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-212ENST00000539372 RTTNQ86VV8 2226 aa16.39■□□□□ 0.22
TNFRSF1A-212ENST00000539372 CUBNO60494 3623 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IGKV1D-43A0A0B4J1Z2 117 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 LOC100289279A0A1B0GTE1 492 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 LRP5LA4QPB2 252 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CENPBD1B2RD01 187 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IFNW1P05000 195 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 MAKP20794 623 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IFNA8P32881 189 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 EVX1P49640 407 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SEC24CP53992 1094 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 FMODQ06828 376 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ALG10Q5BKT4 473 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IGFN1Q86VF2 1251 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NRMQ8IXM6 262 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ARIH2OSQ8N7S6 290 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ZNF540Q8NDQ6 660 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 RBM15BQ8NDT2 890 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 MSI2Q96DH6 328 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TXNIPQ9H3M7 391 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CHODLQ9H9P2 273 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 EFCAB1Q9HAE3 211 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 MAN2C1Q9NTJ4 1040 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 DUSP13Q9UII6 198 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CDC42EP3Q9UKI2 254 aa16.39■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TRAV27A0A087WT01 109 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 FFAR1O14842 300 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 LMX1BO60663 402 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SERPINA1P01009 418 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SAGP10523 405 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ZNF23P17027 643 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 GIFP27352 417 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 GSK3BP49841 420 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NUDT2P50583 147 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CD47Q08722 323 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ALKBH6Q3KRA9 238 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IFI44LQ53G44 452 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 C10orf128Q5T292 105 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 C8orf82Q6P1X6 216 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 FKBP9P1Q75LS8 142 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 DPPA2Q7Z7J5 298 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 OFCC1Q8IZS5 231 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ZNF786Q8N393 782 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CLDN22Q8N7P3 220 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 GEMIN6Q8WXD5 167 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 HSH2DQ96JZ2 352 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 HOPXQ9BPY8 73 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SOX7Q9BT81 388 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 BEX2Q9BXY8 128 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CDH20Q9HBT6 801 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 STX18Q9P2W9 335 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 HIF3AQ9Y2N7 669 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 UGT2A1Q9Y4X1 527 aa16.38■□□□□ 0.21
TNFRSF1A-212ENST00000539372 A0A1W2PPW3 197 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IFNA2P01563 188 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NAT2P11245 290 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NCK1P16333 377 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ZNF133P52736 654 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CTXN1P60606 82 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ERVS71-1P61550 626 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 HSF2Q03933 536 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TRAM2Q15035 370 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SGCAQ16586 387 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NRN1LQ496H8 165 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 FAM166AQ6J272 317 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 RGS7BPQ6MZT1 257 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 PODNL1Q6PEZ8 512 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TBPL2Q6SJ96 375 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CBLL1Q75N03 491 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CXXC5Q7LFL8 322 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 OR51A7Q8NH64 312 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 FAM162AQ96A26 154 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NMD3Q96D46 503 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 KCTD14Q9BQ13 255 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ELAC2Q9BQ52 826 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SHARPINQ9H0F6 387 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TMEM160Q9NX00 188 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ZNF346Q9UL40 294 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 KCNS2Q9ULS6 477 aa16.37■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IQCMA0A1B0GVH7 501 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NPIPB13A6NJU9 1138 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 EFCAB9A8MZ26 197 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NPIPB4C9JG80 1138 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 MMP7P09237 267 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms