RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 ZNF226Q9NYT6 803 aa9.72□□□□□ -0.85
AC087235.1-201ENST00000538297 VSX1Q9NZR4 365 aaPredicted RBP9.72□□□□□ -0.85
AC087235.1-201ENST00000538297 PRSS50Q9UI38 385 aa9.72□□□□□ -0.85
AC087235.1-201ENST00000538297 ADAM18Q9Y3Q7 739 aa9.72□□□□□ -0.85
AC087235.1-201ENST00000538297 IER3IP1Q9Y5U9 82 aa9.72□□□□□ -0.85
AC087235.1-201ENST00000538297 FREM1Q5H8C1 2179 aa9.71□□□□□ -0.85
AC087235.1-201ENST00000538297 SLC22A23A1A5C7 686 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 NKX2-6A6NCS4 301 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 OR5H1A6NKK0 313 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 RIIAD1A6NNX1 92 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 ARHGEF9O43307 516 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 DHHO43323 396 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 FARS2O95363 451 aaKnown RBP9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 WNT11O96014 354 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 TP53P04637 393 aaPredicted RBP9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 QDPRP09417 244 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 ZNF16P17020 682 aaPredicted RBP9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 ZNF3P17036 446 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 PAICSP22234 425 aaKnown RBP9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 IGHV1-2P23083 117 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 HOXC12P31275 282 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 MRPS34P82930 218 aaKnown RBP9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 CD47Q08722 323 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 FAM27E3Q08E93 113 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 GABRA6Q16445 453 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 C3orf36Q3SXR2 165 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 JAZF1Q86VZ6 243 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 CXorf67Q86X51 503 aaPredicted RBP9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 HS3ST5Q8IZT8 346 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 TRUB1Q8WWH5 349 aaKnown RBP9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 MCHR2Q969V1 340 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 NMD3Q96D46 503 aaKnown RBP9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 GABARAPL3Q9BY60 117 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 VCX3BQ9H321 246 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 EGLN3Q9H6Z9 239 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 RNPEPL1Q9HAU8 725 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 CMC2Q9NRP2 79 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 KCNN3Q9UGI6 736 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 FBXL3Q9UKT7 428 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 AMDHD2Q9Y303 409 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 HCFC1P51610 2035 aa9.71□□□□□ -0.86
AC087235.1-201ENST00000538297 SPTAN1Q13813 2472 aaKnown RBP9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 USP9YO00507 2555 aaPredicted RBP9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 TENM4Q6N022 2769 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 ARPC4-TTLL3A0A0A6YYG9 625 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 SAC3D1A6NKF1 404 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 PRSS44E7EML9 344 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 H0YJX3 145 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 CASKO14936 926 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 UPK3AO75631 287 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 PPP1R3DO95685 299 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 ITGA5P08648 1049 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 OR8G3PP0DMU2 310 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 EPXP11678 715 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 KIR2DL3P43628 341 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 GLO1Q04760 184 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 SLC34A1Q06495 639 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 NPRL3Q12980 569 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 TOP3AQ13472 1001 aaPredicted RBP9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 MELKQ14680 651 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 GINS1Q14691 196 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 PTGES3Q15185 160 aaKnown RBP9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 CDSNQ15517 529 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 OCLNQ16625 522 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 CEACAM16Q2WEN9 425 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 PGGHGQ32M88 737 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 MESTQ5EB52 335 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 CLEC12AQ5QGZ9 265 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 SLC25A47Q6Q0C1 308 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 KLHL24Q6TFL4 600 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 SYT9Q86SS6 491 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 IGFN1Q86VF2 1251 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 CBR4Q8N4T8 237 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 SYT14Q8NB59 555 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 OR2T4Q8NH00 348 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 HDAC2Q92769 488 aaKnown RBP9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 ACTR6Q9GZN1 396 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 RASSF4Q9H2L5 321 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 KCNN2Q9H2S1 579 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 FN3KQ9H479 309 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 SIAEQ9HAT2 523 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 TMEFF2Q9UIK5 374 aaPredicted RBP9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 FKBP7Q9Y680 259 aa9.7□□□□□ -0.86
AC087235.1-201ENST00000538297 TEX13CA0A0J9YWL9 993 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 ZAR1LA6NP61 321 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 SOCS2O14508 198 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 EI24O14681 340 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 KHDRBS3O75525 346 aaKnown RBP9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 SOX14O95416 240 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 IGHV3-9P01782 118 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 HRGP04196 525 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 HIST1H1CP16403 213 aaKnown RBP9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 POU1F1P28069 291 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 MAP2K3P46734 347 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 PTDSS1P48651 473 aaKnown RBP9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 SLC25A1P53007 311 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 UBE2NP61088 152 aaKnown RBP9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 PCBD1P61457 104 aa9.69□□□□□ -0.86
AC087235.1-201ENST00000538297 LSM6P62312 80 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms