RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 STK35Q8TDR2 534 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 GATAD2BQ8WXI9 593 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 PAFAH2Q99487 392 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 SLC38A1Q9H2H9 487 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 B3GAT2Q9NPZ5 323 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 ATAD3AQ9NVI7 634 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 TMED5Q9Y3A6 229 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 FIS1Q9Y3D6 152 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 IGHV1-69DA0A0B4J2H0 117 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 LCE6AA0A183 80 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 POC1B-GALNT4F8VUJ3 575 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 MS4A18H0YCH9 400 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 TMEM178BH3BS89 294 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 AIM2O14862 343 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 FZD7O75084 574 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 AGR2O95994 175 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 IGHV1-69P01742 117 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 MMP9P14780 707 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 PTMSP20962 102 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 RPS4Y1P22090 263 aaKnown RBP6.85□□□□□ -1.31
CLIP1-206ENST00000535290 CBLP22681 906 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 GRPRP30550 384 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 MSX2P35548 267 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-206ENST00000535290 TGFBR2P37173 567 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 RPL3P39023 403 aaKnown RBP6.85□□□□□ -1.31
CLIP1-206ENST00000535290 WNT5AP41221 380 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 SERPINB9P50453 376 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 EFNB2P52799 333 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 CDK5R2Q13319 367 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 SYPL1Q16563 259 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 MS4A18Q3C1V0 323 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 MBNL2Q5VZF2 373 aaKnown RBP6.85□□□□□ -1.31
CLIP1-206ENST00000535290 SLC27A4Q6P1M0 643 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 C1orf122Q6ZSJ8 110 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 H1FNTQ75WM6 255 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-206ENST00000535290 PIWIL3Q7Z3Z3 882 aaKnown RBP6.85□□□□□ -1.31
CLIP1-206ENST00000535290 UEVLDQ8IX04 471 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 GALNT4Q8N4A0 578 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 OR1J2Q8NGS2 313 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 SLC25A40Q8TBP6 338 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 C10orf82Q8WW14 230 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 TAAR8Q969N4 342 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 R3HDM4Q96D70 268 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 SAMD8Q96LT4 415 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 DUSP26Q9BV47 211 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 DPY30Q9C005 99 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 TRIM15Q9C019 465 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 OR2J1Q9GZK6 312 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 DPAGT1Q9H3H5 408 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 RNF121Q9H920 327 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 CYSLTR2Q9NS75 346 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 NINJ2Q9NZG7 142 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 ZDHHC8Q9ULC8 765 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 USH1CQ9Y6N9 552 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 U3KQK5 164 aa6.85□□□□□ -1.31
CLIP1-206ENST00000535290 A0A096LPI6 279 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 CDHR4A6H8M9 788 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 GOLGA6L6A8MZA4 724 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 TMEM114B3SHH9 223 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 G3V2L1 256 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 H3BQF6 201 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 P2RY10O00398 339 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 HMGN4O00479 90 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 TOX4O94842 621 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 NEFHP12036 1026 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 IL7RP16871 459 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 CCNOP22674 350 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 CPT2P23786 658 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 ARRB2P32121 409 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 CRHR1P34998 444 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 LIPAP38571 399 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 PITPNBP48739 271 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 COPZ1P61923 177 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 HPCAP84074 193 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 CAV1Q03135 178 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 RUNDC3AQ59EK9 446 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 XKR7Q5GH72 579 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 ZBTB37Q5TC79 503 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 LRFN4Q6PJG9 635 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 SNX32Q86XE0 403 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 RIMKLAQ8IXN7 391 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 PDZD9Q8IXQ8 264 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 ZNF440Q8IYI8 595 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 NATD1Q8N6N6 113 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 KLHDC1Q8N7A1 406 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 WFDC9Q8NEX5 89 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 OR4K5Q8NGD3 323 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 PPP1R35Q8TAP8 253 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 ITLN1Q8WWA0 313 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 LRTOMTQ8WZ04 291 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 CCDC126Q96EE4 140 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 NEIL1Q96FI4 390 aaPredicted RBP6.84□□□□□ -1.31
CLIP1-206ENST00000535290 PLEKHA8Q96JA3 519 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 TRNT1Q96Q11 434 aaKnown RBP6.84□□□□□ -1.31
CLIP1-206ENST00000535290 RHOXF2Q9BQY4 288 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 TMEM246Q9BRR3 403 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 C1orf50Q9BV19 199 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 FUT8Q9BYC5 575 aa6.84□□□□□ -1.31
CLIP1-206ENST00000535290 LRMDAQ9H2I8 198 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms