RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 HTRA1Q92743 480 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 NMD3Q96D46 503 aaKnown RBP13.33□□□□□ -0.28
CPSF1-210ENST00000532935 MS4A3Q96HJ5 214 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 C18orf12Q96KH6 178 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 TSPAN32Q96QS1 320 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 KCNK17Q96T54 332 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 SH3GL3Q99963 347 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 FUZQ9BT04 418 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 BDH2Q9BUT1 245 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 ALG12Q9BV10 488 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 DENND2DQ9H6A0 471 aaPredicted RBP13.33□□□□□ -0.28
CPSF1-210ENST00000532935 ACTR3BQ9P1U1 418 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 GDF2Q9UK05 429 aaPredicted RBP13.33□□□□□ -0.28
CPSF1-210ENST00000532935 ZNF346Q9UL40 294 aaKnown RBP13.33□□□□□ -0.28
CPSF1-210ENST00000532935 CHD3Q12873 2000 aaKnown RBP13.33□□□□□ -0.28
CPSF1-210ENST00000532935 TRIM64A6NGJ6 449 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 TRIM64BA6NI03 449 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 H7C1Q1 480 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 GYG2O15488 501 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 NDUFS7O75251 213 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 SLC2A10O95528 541 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 RAB36O95755 333 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 PATE4P0C8F1 98 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 NR2C1P13056 603 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 ATP6V1B2P21281 511 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 ACVR1BP36896 505 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 OMPP47874 163 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 LIMS1P48059 325 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 GIPRP48546 466 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 SMIM11AP58511 58 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 SPIBQ01892 262 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 HGFACQ04756 655 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 CD47Q08722 323 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 NRN1LQ496H8 165 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 FAM205BPQ63HN1 556 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 VHLLQ6RSH7 139 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 CYP2R1Q6VVX0 501 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 OR4K5Q8NGD3 323 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 ZNF519Q8TB69 540 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 RASSF4Q9H2L5 321 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 SMURF2Q9HAU4 748 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 IL1RAPQ9NPH3 570 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 KRCC1Q9NPI7 259 aaPredicted RBP13.32□□□□□ -0.28
CPSF1-210ENST00000532935 TAS2R1Q9NYW7 299 aa13.32□□□□□ -0.28
CPSF1-210ENST00000532935 NIPBLQ6KC79 2804 aaeCLIP13.32□□□□□ -0.28
CPSF1-210ENST00000532935 RTTNQ86VV8 2226 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 CR1P17927 2039 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 IGKV1D-43A0A0B4J1Z2 117 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 SH3PXD2BA1X283 911 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 A6NIZ1 184 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 ANKRD65E5RJM6 399 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 PDE5AO76074 875 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 GADD45GO95257 159 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 CD14P08571 375 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 INHBBP09529 407 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 BMP4P12644 408 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 ZNF26P17031 533 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-210ENST00000532935 RPL4P36578 427 aaKnown RBP13.31□□□□□ -0.28
CPSF1-210ENST00000532935 SERPINF1P36955 418 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 RAP1BP61224 184 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 RAP1AP62834 184 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 ERVK-25P63136 954 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 CHRNB3Q05901 458 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 FMODQ06828 376 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 RAB39AQ14964 217 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 SWI5Q1ZZU3 235 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 CLEC12BQ2HXU8 276 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 MST1LQ2TV78 715 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 MTX3Q5HYI7 312 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 SLC25A47Q6Q0C1 308 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 SLC16A14Q7RTX9 510 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 ZDHHC21Q8IVQ6 265 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 CIARTQ8N365 385 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-210ENST00000532935 ARIH2OSQ8N7S6 290 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 NSMAFQ92636 917 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 FBXO17Q96EF6 278 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 COX4I2Q96KJ9 171 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 NDEL1Q9GZM8 345 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 MUC13Q9H3R2 512 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 BARX1Q9HBU1 254 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-210ENST00000532935 FBXL3Q9UKT7 428 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 PRPF19Q9UMS4 504 aaKnown RBP13.31□□□□□ -0.28
CPSF1-210ENST00000532935 AURKCQ9UQB9 309 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 UGT2A1Q9Y4X1 527 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 NF1P21359 2839 aa13.31□□□□□ -0.28
CPSF1-210ENST00000532935 H7C417 338 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 GSC2O15499 205 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 PTP4A3O75365 173 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 NDUFB2O95178 105 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 OR4A8P0C604 315 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 ZNF35P13682 527 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 RRM2P31350 389 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 THBS4P35443 961 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 MRPS34P82930 218 aaKnown RBP13.3□□□□□ -0.28
CPSF1-210ENST00000532935 DAG1Q14118 895 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 TRIM25Q14258 630 aaKnown RBP13.3□□□□□ -0.28
CPSF1-210ENST00000532935 ADIPOQQ15848 244 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 SLC36A2Q495M3 483 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 THEM4Q5T1C6 240 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms