RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 ZNF32P17041 273 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 LONP1P36776 959 aaKnown RBP3.7□□□□□ -1.82
CASP4-208ENST00000530309 CCNHP51946 323 aaPredicted RBP3.7□□□□□ -1.82
CASP4-208ENST00000530309 MNAT1P51948 309 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 YWHAGP61981 247 aaKnown RBP eCLIP3.7□□□□□ -1.82
CASP4-208ENST00000530309 SLC7A9P82251 487 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 ECH1Q13011 328 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 PRPSAP1Q14558 356 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 CLINT1Q14677 625 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 KCTD19Q17RG1 926 aaPredicted RBP3.7□□□□□ -1.82
CASP4-208ENST00000530309 TFDP3Q5H9I0 405 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 PDIK1LQ8N165 341 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 LIX1Q8N485 282 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 OR56B2PQ8NGI1 322 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 ZFP90Q8TF47 636 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 RNF139Q8WU17 664 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 MYCBPQ99417 103 aaPredicted RBP3.7□□□□□ -1.82
CASP4-208ENST00000530309 ATP5SQ99766 215 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 CCDC77Q9BR77 488 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 MRPL37Q9BZE1 423 aaKnown RBP3.7□□□□□ -1.82
CASP4-208ENST00000530309 VCXQ9H320 206 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 LHX9Q9NQ69 397 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 CNTNAP1P78357 1384 aa3.7□□□□□ -1.82
CASP4-208ENST00000530309 AP3B1O00203 1094 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 MRPS12O15235 138 aaKnown RBP3.69□□□□□ -1.82
CASP4-208ENST00000530309 IGKV3-11P04433 115 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 CALM1P0DP23 149 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 CALM2P0DP24 149 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 CALM3P0DP25 149 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 SSR4P51571 173 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 ACLYP53396 1101 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 EIF4EBP2Q13542 120 aaPredicted RBP3.69□□□□□ -1.82
CASP4-208ENST00000530309 PON3Q15166 354 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 XKR7Q5GH72 579 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 OR52W1Q6IF63 320 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 SASS6Q6UVJ0 657 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 ZFP2Q6ZN57 461 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 ZNF493Q6ZR52 646 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 Q6ZSR3 168 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 SAXO1Q8IYX7 474 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 STPG2Q8N412 459 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 OR10R2Q8NGX6 335 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 RAB3IL1Q8TBN0 382 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 CCDC126Q96EE4 140 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 WFIKKN1Q96NZ8 548 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 CENPKQ9BS16 269 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 NUP58Q9BVL2 599 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 NMRK1Q9NWW6 199 aa3.69□□□□□ -1.82
CASP4-208ENST00000530309 LSM7Q9UK45 103 aaKnown RBP3.69□□□□□ -1.82
CASP4-208ENST00000530309 USP47Q96K76 1375 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 F6UB75 175 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 MAGEB4O15481 346 aaPredicted RBP3.68□□□□□ -1.82
CASP4-208ENST00000530309 ANGPTL7O43827 346 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 EEDO75530 441 aaKnown RBP3.68□□□□□ -1.82
CASP4-208ENST00000530309 WBP4O75554 376 aaKnown RBP3.68□□□□□ -1.82
CASP4-208ENST00000530309 UTS2O95399 124 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 CLIC3O95833 236 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 MAGP20916 626 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 HRH1P35367 487 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 NSG1P42857 185 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 NUTF2P61970 127 aaKnown RBP3.68□□□□□ -1.82
CASP4-208ENST00000530309 ACTA2P62736 377 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 ACTG2P63267 376 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 ACTC1P68032 377 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 ACTA1P68133 377 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 ANKRD26P1Q6NSI1 321 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 ABHD13Q7L211 337 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 LKAAEAR1Q8TD35 194 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 STARD8Q92502 1023 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 CNDP1Q96KN2 507 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 BMFQ96LC9 184 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 ING4Q9UNL4 249 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 PSG11Q9UQ72 335 aa3.68□□□□□ -1.82
CASP4-208ENST00000530309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.67□□□□□ -1.82
CASP4-208ENST00000530309 TRIM64CA6NLI5 447 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 H0YHG0 523 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 CDC7O00311 574 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 SPAG7O75391 227 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 PRB2P02812 416 aaPredicted RBP3.67□□□□□ -1.82
CASP4-208ENST00000530309 ZNF24P17028 368 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 GDI1P31150 447 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 TNNT2P45379 298 aaPredicted RBP3.67□□□□□ -1.82
CASP4-208ENST00000530309 CYB561P49447 251 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 EBI3Q14213 229 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 DEFB116Q30KQ4 102 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 ARMC12Q5T9G4 340 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 SLC8B1Q6J4K2 584 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 FBXL13Q8NEE6 735 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 OR7G2Q8NG99 324 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 OR10G4Q8NGN3 311 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 PKNOX2Q96KN3 472 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 RACGAP1Q9H0H5 632 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 SLC40A1Q9NP59 571 aa3.67□□□□□ -1.82
CASP4-208ENST00000530309 FGF20Q9NP95 211 aaPredicted RBP3.67□□□□□ -1.82
CASP4-208ENST00000530309 MTCL1Q9Y4B5 1905 aaKnown RBP3.66□□□□□ -1.82
CASP4-208ENST00000530309 RAB29O14966 203 aa3.66□□□□□ -1.82
CASP4-208ENST00000530309 RNF13O43567 381 aa3.66□□□□□ -1.82
CASP4-208ENST00000530309 TSPAN13O95857 204 aa3.66□□□□□ -1.82
CASP4-208ENST00000530309 FOXN2P32314 431 aa3.66□□□□□ -1.82
CASP4-208ENST00000530309 NAA10P41227 235 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms