RNA–Protein interactions for RNA: ENST00000528533.5

MCAM-208, Transcript of melanoma cell adhesion molecule, human

TSL 5

Gene MCAM, Length 3,164 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCAM-208	ENST00000528533	LRRTM1	Q86UE6	522 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	C1orf216	Q8TAB5	229 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	CCNL2	Q96S94	520 aa	Predicted RBP	11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	HEXA-AS1	Q9H8Q6	139 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	EXOSC3	Q9NQT5	275 aa	Known RBP	11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	DLL4	Q9NR61	685 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	KLHL9	Q9P2J3	617 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	DHCR7	Q9UBM7	475 aa	Known RBP	11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	SLC6A5	Q9Y345	797 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	SDK1	Q7Z5N4	2213 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	OR4C45	A6NMZ5	311 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	STMND1	H3BQB6	276 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	KRT33A	O76009	404 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	MAS1	P04201	325 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	GALNS	P34059	522 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	P2RX1	P51575	399 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	DEFB133	Q30KQ1	61 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	TMEM69	Q5SWH9	247 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	LUZP2	Q86TE4	346 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	THEM6	Q8WUY1	208 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	ADIPOR1	Q96A54	375 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	S100A16	Q96FQ6	103 aa	Known RBP	11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	LCOR	Q96JN0	433 aa	Predicted RBP	11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	SLC46A1	Q96NT5	459 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	ADAM19	Q9H013	955 aa		11.2	□□□□□ -0.62
MCAM-208	ENST00000528533	TRBV5-5	A0A0J9YX44	114 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	C11orf98	E9PRG8	122 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	HCRTR2	O43614	444 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	KHDRBS3	O75525	346 aa	Known RBP	11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	DDAH2	O95865	285 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	WDPCP	O95876	746 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	ALOX5AP	P20292	161 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	PSMB1	P20618	241 aa	Known RBP	11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	SSTR2	P30874	369 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	RORA	P35398	523 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	DMWD	Q09019	674 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	ZNF169	Q14929	603 aa	Predicted RBP	11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	BEND4	Q6ZU67	534 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	FGD2	Q7Z6J4	655 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	MARCH3	Q86UD3	253 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	TMPRSS12	Q86WS5	348 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	DND1	Q8IYX4	353 aa	Known RBP	11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	OR2G2	Q8NGZ5	317 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	OR2T4	Q8NH00	348 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	FCAMR	Q8WWV6	532 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	HGD	Q93099	445 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	CCDC74A	Q96AQ1	378 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	HAVCR1	Q96D42	359 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	MNT	Q99583	582 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	ACTR6	Q9GZN1	396 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	ELF5	Q9UKW6	265 aa	Predicted RBP	11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	EDAR	Q9UNE0	448 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	FKBP7	Q9Y680	259 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	FITM1	A5D6W6	292 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	TLCD2	A6NGC4	264 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	LILRA5	A6NI73	299 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	KHNYN	O15037	678 aa	Known RBP	11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	TOX	O94900	526 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	IGKV3-11	P04433	115 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	NME1	P15531	152 aa	Known RBP	11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	DCTD	P32321	178 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	ZP2	Q05996	745 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	TCTE1	Q5JU00	501 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	TEX261	Q6UWH6	196 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	TFAP2E	Q6VUC0	442 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	PRSS35	Q8N3Z0	413 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	ZNF721	Q8TF20	911 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	NPAS1	Q99742	590 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	PELO	Q9BRX2	385 aa	Known RBP	11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	CUTC	Q9NTM9	273 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533		U3KQ87	197 aa		11.19	□□□□□ -0.62
MCAM-208	ENST00000528533	FRG2C	A6NGY1	282 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533		G3V3Q6	166 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	ARPC1B	O15143	372 aa	Known RBP	11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	SDC3	O75056	442 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	PLG	P00747	810 aa	Predicted RBP	11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	ITPKB	P27987	946 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	BPIFB3	P59826	476 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	FAM69A	Q5T7M9	428 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	EEF1A1P5	Q5VTE0	462 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	PRSS58	Q8IYP2	241 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	NSMAF	Q92636	917 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	RBPMS	Q93062	196 aa	Known RBP	11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	TMEM106A	Q96A25	262 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	MIB2	Q96AX9	1013 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	NUDT9	Q9BW91	350 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	SHARPIN	Q9H0F6	387 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	ESRP2	Q9H6T0	727 aa	Known RBP	11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	METTL17	Q9H7H0	456 aa	Predicted RBP	11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	TAS2R5	Q9NYW4	299 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	KCNG2	Q9UJ96	466 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	TMEM150C	B9EJG8	249 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	HIST1H2AB	P04908	130 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	CALCB	P10092	127 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	DNASE1	P24855	282 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	RAD52	P43351	418 aa		11.18	□□□□□ -0.62
MCAM-208	ENST00000528533	ART1	P52961	327 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms