RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FAM168AQ92567 244 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 SORCS2Q96PQ0 1159 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 NDUFAF4Q9P032 175 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 TAGLN3Q9UI15 199 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 hCG_2039718K7EN88 272 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 RPL27P61353 136 aaKnown RBP28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 MRPS34P82930 218 aaKnown RBP28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 SLC36A2Q495M3 483 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 KRT80Q6KB66 452 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 ZNF584Q8IVC4 421 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 ANKS4BQ8N8V4 417 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 MAPK1IP1LQ8NDC0 245 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 C10orf105Q8TEF2 133 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 HDAC2Q92769 488 aaKnown RBP28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 DOK1Q99704 481 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 SH3GL3Q99963 347 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 C1orf198Q9H425 327 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 MYOZ1Q9NP98 299 aaPredicted RBP28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 TMEM5Q9Y2B1 443 aa28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 FAM32AQ9Y421 112 aaKnown RBP28.54■■■□□ 2.16
SSSCA1-205ENST00000527920 RHCEP18577 417 aa28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 EVX1P49640 407 aa28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 MYBPC1Q00872 1141 aa28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 RAB39AQ14964 217 aa28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 TMEM53Q6P2H8 277 aa28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 RBM15BQ8NDT2 890 aaKnown RBP28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 SLC7A13Q8TCU3 470 aa28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 C7orf34Q96L11 122 aa28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 MAGEL2Q9UJ55 1249 aa28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 CMAHPQ9Y471 501 aa28.53■■■□□ 2.16
SSSCA1-205ENST00000527920 TRAV27A0A087WT01 109 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 H1F0P07305 194 aaKnown RBP28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 PATE4P0C8F1 98 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 GLRXP35754 106 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 CTXN1P60606 82 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 RPS23P62266 143 aaKnown RBP28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 LOXL1Q08397 574 aaPredicted RBP28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 SPATS1Q496A3 300 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 SAMD4BQ5PRF9 694 aaKnown RBP28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 RRM2BQ7LG56 351 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 SLC16A14Q7RTX9 510 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 RNF148Q8N7C7 305 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 OR51A7Q8NH64 312 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 SIAEQ9HAT2 523 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 NDE1Q9NXR1 346 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 SLC7A8Q9UHI5 535 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 UGT2A1Q9Y4X1 527 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 ABCA1O95477 2261 aa28.52■■■□□ 2.16
SSSCA1-205ENST00000527920 TMEM129A0AVI4 362 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 A6NIZ1 184 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 RAP1BP61224 184 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 RAP1AP62834 184 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 PPP2R2BQ00005 443 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 GALK2Q01415 458 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 CD47Q08722 323 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 TOP3AQ13472 1001 aaPredicted RBP28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 THEM4Q5T1C6 240 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 TBPL2Q6SJ96 375 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 OR13C2Q8NGS9 318 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 ZNF519Q8TB69 540 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 TNFRSF13CQ96RJ3 184 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 VRK1Q99986 396 aaPredicted RBP28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 RAB1BQ9H0U4 201 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 ARL8BQ9NVJ2 186 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 CD300AQ9UGN4 299 aa28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 ZNF346Q9UL40 294 aaKnown RBP28.51■■■□□ 2.15
SSSCA1-205ENST00000527920 NDUFS8O00217 210 aa28.5■■■□□ 2.15
SSSCA1-205ENST00000527920 SLC2A10O95528 541 aa28.5■■■□□ 2.15
SSSCA1-205ENST00000527920 PTHP01270 115 aa28.5■■■□□ 2.15
SSSCA1-205ENST00000527920 SVOPLQ8N434 492 aa28.5■■■□□ 2.15
SSSCA1-205ENST00000527920 MRPL24Q96A35 216 aaKnown RBP28.5■■■□□ 2.15
SSSCA1-205ENST00000527920 DHRS1Q96LJ7 313 aa28.5■■■□□ 2.15
SSSCA1-205ENST00000527920 CR1P17927 2039 aa28.5■■■□□ 2.15
SSSCA1-205ENST00000527920 CDC42EP2O14613 210 aa28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 TP53P04637 393 aaPredicted RBP28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 PDLIM4P50479 330 aa28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 SLC25A47Q6Q0C1 308 aa28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 MEX3DQ86XN8 651 aaKnown RBP28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 FAM86B1Q8N7N1 296 aa28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 SLC30A7Q8NEW0 376 aa28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 RBP7Q96R05 134 aa28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 NDEL1Q9GZM8 345 aa28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 RNF121Q9H920 327 aa28.49■■■□□ 2.15
SSSCA1-205ENST00000527920 SLC22A23A1A5C7 686 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 GPRIN2O60269 458 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 LY6HO94772 140 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 SNAP29O95721 258 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 ERCC1P07992 297 aaPredicted RBP28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 MMP7P09237 267 aaPredicted RBP28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 ITGA2P17301 1181 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 GPR4P46093 362 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 MNAT1P51948 309 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 VLDLRP98155 873 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 FMODQ06828 376 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 ZBED5Q49AG3 693 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 GKAP1Q5VSY0 366 aaPredicted RBP28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 PODNL1Q6PEZ8 512 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 C16orf89Q6UX73 402 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 ARIH2OSQ8N7S6 290 aa28.48■■■□□ 2.15
SSSCA1-205ENST00000527920 NABP1Q96AH0 204 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms