RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MIB2Q96AX9 1013 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 OR14A2Q96R54 314 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 PLA2G12AQ9BZM1 189 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 EXOSC3Q9NQT5 275 aaKnown RBP13.67□□□□□ -0.22
USP47-207ENST00000527733 COPZ2Q9P299 210 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 HRH3Q9Y5N1 445 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 RAB40ALP0C0E4 278 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 RAB12Q6IQ22 244 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 CBLN3Q6UW01 205 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 BBS1Q8NFJ9 593 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 RAB40AQ8WXH6 277 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 FBXO8Q9NRD0 319 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 ZNF223Q9UK11 482 aaPredicted RBP13.67□□□□□ -0.22
USP47-207ENST00000527733 P2RY10O00398 339 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 SGCEO43556 437 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 HPGDSO60760 199 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 WBP4O75554 376 aaKnown RBP13.67□□□□□ -0.22
USP47-207ENST00000527733 CAV3P56539 151 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 MC2RQ01718 297 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 ZMAT1Q5H9K5 638 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 PPP1R35Q8TAP8 253 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 MICU1Q9BPX6 476 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 MFRPQ9BY79 579 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 PLEKHJ1Q9NW61 149 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 ASH2LQ9UBL3 628 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 HRKO00198 91 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 ZNF254O75437 659 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 HPP00738 406 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 PRKACBP22694 351 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 TNFSF4P23510 183 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 BDKRB2P30411 391 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 KCTD9Q7L273 389 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 EMC7Q9NPA0 242 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 ZFP64Q9NPA5 681 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 NOX4Q9NPH5 578 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 KCNIP1Q9NZI2 227 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 LHX6Q9UPM6 363 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 SPTBP11277 2137 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 DOK2O60496 412 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 H2AFB2P0C5Z0 115 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 LAP3P28838 519 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 TIGD3Q6B0B8 471 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 HEPHL1Q6MZM0 1159 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 SLC23A3Q6PIS1 610 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 AKAP1Q92667 903 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP47-207ENST00000527733 RASL10BQ96S79 203 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 IMPA2O14732 288 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 AMY2AP04746 511 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 DUSP2Q05923 314 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 WIPI1Q5MNZ9 446 aaPredicted RBP13.66□□□□□ -0.22
USP47-207ENST00000527733 STPG1Q5TH74 334 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 FCRLAQ7L513 359 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 PHC2Q8IXK0 858 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 C10orf111Q8N326 155 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 GALNT16Q8N428 558 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 PDCD1LG2Q9BQ51 273 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 MOV10Q9HCE1 1003 aaKnown RBP13.66□□□□□ -0.22
USP47-207ENST00000527733 OBP2BQ9NPH6 170 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 NLKQ9UBE8 527 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 MN1Q10571 1320 aaPredicted RBP13.66□□□□□ -0.22
USP47-207ENST00000527733 VWA8A3KMH1 1905 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 C13orf42A0A1B0GVH6 325 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 TNFSF11O14788 317 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 ZNF16P17020 682 aaPredicted RBP13.66□□□□□ -0.22
USP47-207ENST00000527733 HOXB9P17482 250 aaPredicted RBP13.66□□□□□ -0.22
USP47-207ENST00000527733 PSMA6P60900 246 aaKnown RBP13.66□□□□□ -0.22
USP47-207ENST00000527733 LTBQ06643 244 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 SFRP4Q6FHJ7 346 aaPredicted RBP13.66□□□□□ -0.22
USP47-207ENST00000527733 SYS1Q8N2H4 156 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 OR5H2Q8NGV7 314 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 GPR119Q8TDV5 335 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 C20orf141Q9NUB4 165 aa13.66□□□□□ -0.22
USP47-207ENST00000527733 FIGNL2A6NMB9 653 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 PTTG1O95997 202 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 IL2RAP01589 272 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 TP53P04637 393 aaPredicted RBP13.65□□□□□ -0.22
USP47-207ENST00000527733 MYBPHQ13203 477 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 PCGF3Q3KNV8 242 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 ZNF684Q5T5D7 378 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 DCDC5Q6ZRR9 648 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 TEX51A0A1B0GUA7 166 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 L7N2F9 121 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 MTCP1P56278 107 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 VAMP2P63027 116 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 SWI5Q1ZZU3 235 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 CCDC58Q4VC31 144 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 C12orf73Q69YU5 71 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 FAM181AQ8N9Y4 354 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 INO80EQ8NBZ0 244 aaPredicted RBP13.65□□□□□ -0.22
USP47-207ENST00000527733 IL17RDQ8NFM7 739 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 CPNE4Q96A23 557 aaPredicted RBP13.65□□□□□ -0.22
USP47-207ENST00000527733 C12orf10Q9HB07 376 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 ACOXLQ9NUZ1 547 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 SHISA8B8ZZ34 492 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 LYRM1O43325 122 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 DBHP09172 617 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 PAQR6Q6TCH4 344 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 CSNK2A3Q8NEV1 391 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 OR9K2Q8NGE7 335 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 THAP6Q8TBB0 222 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms