RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 GTPBP3Q969Y2 492 aaKnown RBP4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 Q96M85 177 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 ERMAPQ96PL5 475 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 TSPAN32Q96QS1 320 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 GPX7Q96SL4 187 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 KCNK17Q96T54 332 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 TMEM204Q9BSN7 226 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 FUZQ9BT04 418 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 MRPL13Q9BYD1 178 aaKnown RBP4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR52D1Q9H346 318 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 RERGLQ9H628 205 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 PLEKHF2Q9H8W4 249 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 SEC61A2Q9H9S3 476 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 CCM2LQ9NUG4 571 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 TMEM38BQ9NVV0 291 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 BEX4Q9NWD9 120 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 CISD1Q9NZ45 108 aaKnown RBP4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 NPAP1Q9NZP6 1156 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 DNAJB9Q9UBS3 223 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 IL20RAQ9UHF4 553 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF346Q9UL40 294 aaKnown RBP4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 BAIAP2Q9UQB8 552 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 POLR1DQ9Y2S0 133 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 ADAM18Q9Y3Q7 739 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 IER3IP1Q9Y5U9 82 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 CDH10Q9Y6N8 788 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 COL12A1Q99715 3063 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 PCNX1Q96RV3 2341 aa4.72□□□□□ -1.65
HMGB1P40-201ENST00000525121 INTS1Q8N201 2190 aaKnown RBP4.71□□□□□ -1.65
HMGB1P40-201ENST00000525121 ANKHD1Q8IWZ3 2542 aaKnown RBP4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 IGHV1-18A0A0C4DH31 117 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLC22A23A1A5C7 686 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 DPRXA6NFQ7 191 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 RIIAD1A6NNX1 92 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ATP6V1G2-DDX39BF2Z307 99 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 H7C1C5 153 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ARPC3O15145 178 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLC16A7O60669 478 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 PTP4A3O75365 173 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 KHDRBS3O75525 346 aaKnown RBP4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ATE1O95260 518 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 IGKV3-15P01624 115 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ERCC1P07992 297 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 CECR9P0C854 216 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ANXA8P13928 327 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF3P17036 446 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 MSR1P21757 451 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 FUT4P22083 530 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 FASP25445 335 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 APLNRP35414 380 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 GIPRP48546 466 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ERFP50548 548 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 FABP6P51161 128 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ART1P52961 327 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 RPS23P62266 143 aaKnown RBP4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 LCN6P62502 163 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 RAB1AP62820 205 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 NAAAQ02083 359 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 RUNX1T1Q06455 604 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 FMODQ06828 376 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 PIGFQ07326 219 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 COX10Q12887 443 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 TBC1D28Q2M2D7 210 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 DEFB113Q30KQ7 82 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 MESTQ5EB52 335 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 CLEC12AQ5QGZ9 265 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF544Q6NX49 715 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZFP1Q6P2D0 407 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 LEG1Q6P5S2 330 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 LRFN4Q6PJG9 635 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 NHLRC1Q6VVB1 395 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 RASSF6Q6ZTQ3 369 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 GLB1L2Q8IW92 636 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ALDH16A1Q8IZ83 802 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 LRRC18Q8N456 261 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 CLDN22Q8N7P3 220 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 LRRC75AQ8NAA5 344 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 PAPD5Q8NDF8 572 aaKnown RBP4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR2T33Q8NG76 320 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR10H5Q8NGA6 315 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR1J2Q8NGS2 313 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 SMAP2Q8WU79 429 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 NRGNQ92686 78 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 STMN2Q93045 179 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 RASD2Q96D21 266 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 MBD6Q96DN6 1003 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF837Q96EG3 531 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 TRMT61AQ96FX7 289 aaKnown RBP4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 SAMD8Q96LT4 415 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 SNX18Q96RF0 628 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 SH3GL3Q99963 347 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 DHRS9Q9BPW9 319 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 WACQ9BTA9 647 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 BDH2Q9BUT1 245 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 DGCR6LQ9BY27 220 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 PRRG3Q9BZD7 231 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 SYT4Q9H2B2 425 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 NELFAQ9H3P2 528 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 SIAEQ9HAT2 523 aa4.71□□□□□ -1.66
HMGB1P40-201ENST00000525121 CDH20Q9HBT6 801 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms