RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 UQCRC1P31930 480 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 GUCA1AP43080 201 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-216ENST00000524481 CLDN17P56750 224 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 OPN5Q6U736 354 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 SLC16A9Q7RTY1 509 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 UEVLDQ8IX04 471 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 MS4A15Q8N5U1 240 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 WDSUB1Q8N9V3 476 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 DEFB124Q8NES8 71 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 SMIM19Q96E16 107 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 MRPL48Q96GC5 212 aaKnown RBP10.56□□□□□ -0.72
PTPRK-216ENST00000524481 FRRS1LQ9P0K9 344 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 CDV3Q9UKY7 258 aaKnown RBP10.56□□□□□ -0.72
PTPRK-216ENST00000524481 ANXA2P2A6NMY6 339 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 MS4A18H0YCH9 400 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 J3QRE1 110 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 NTN3O00634 580 aaPredicted RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ANXA2P07355 339 aaKnown RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ENPP1P22413 925 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 TAS2R43P59537 309 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ISXQ2M1V0 245 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 MS4A18Q3C1V0 323 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 GPR139Q6DWJ6 353 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 FCRLAQ7L513 359 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 NAXDQ8IW45 347 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 OR4M1Q8NGD0 313 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 COMMD4Q9H0A8 199 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 TXNIPQ9H3M7 391 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 KCNK15Q9H427 330 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 IL17BQ9UHF5 180 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 A0A0G2JMM0 328 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 A0A1W2PPB8 328 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 A0A1W2PQD3 144 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 A0A1W2PRS3 328 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 SLC22A23A1A5C7 686 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 MEIS3P1A6NDR6 274 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 KIR3DP1A8MWS1 328 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ARL6IP5O75915 188 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 COX6A1P12074 109 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 SRMP19623 302 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 TGM1P22735 817 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 FGF9P31371 208 aaPredicted RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 APOBEC1P41238 236 aaKnown RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 CD97P48960 835 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF181Q2M3W8 571 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 RPL22L1Q6P5R6 122 aaKnown RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 LINGO2Q7L985 606 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 PGLYRP3Q96LB9 341 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 SDHCQ99643 169 aaPredicted RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 IER2Q9BTL4 223 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 HES7Q9BYE0 225 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 PALMDQ9NP74 551 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 FBXO4Q9UKT5 387 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 V9GYH0 126 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ICE1Q9Y2F5 2266 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 TRAV6A0A075B6T7 132 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 CDX4O14627 284 aaPredicted RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 TNFSF11O14788 317 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 IDH3BO43837 385 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ATF1P18846 271 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ENDOUP21128 410 aaKnown RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 WIPI1Q5MNZ9 446 aaPredicted RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 TMEM205Q6UW68 189 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 PLCZ1Q86YW0 608 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 PLPP7Q8NBV4 271 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ZBTB44Q8NCP5 570 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ABHD6Q9BV23 337 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 ZMAT3Q9HA38 289 aaKnown RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 NXT1Q9UKK6 140 aaKnown RBP10.55□□□□□ -0.72
PTPRK-216ENST00000524481 NOX1Q9Y5S8 564 aa10.55□□□□□ -0.72
PTPRK-216ENST00000524481 FAM166BA8MTA8 275 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 CSF3P09919 207 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.54□□□□□ -0.722e-6■■■■□ 21.7
PTPRK-216ENST00000524481 DMKNQ6E0U4 476 aaPredicted RBP10.54□□□□□ -0.72
PTPRK-216ENST00000524481 SLC18B1Q6NT16 456 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 LRRC75AQ8NAA5 344 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 HGDQ93099 445 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 SPACA5Q96QH8 159 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 C11orf54Q9H0W9 315 aaPredicted RBP10.54□□□□□ -0.72
PTPRK-216ENST00000524481 SLITRK2Q9H156 845 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 ST6GALNAC2Q9UJ37 374 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF281Q9Y2X9 895 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 MT-CO3P00414 261 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 MT-ATP6P00846 226 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 H2BFMP0C1H6 154 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 GDF1P27539 372 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 SLC6A9P48067 706 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 ALKBH1Q13686 389 aaKnown RBP10.54□□□□□ -0.72
PTPRK-216ENST00000524481 RNLSQ5VYX0 342 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 NDUFAF7Q7L592 441 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 TIGD4Q8IY51 512 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 JAGN1Q8N5M9 183 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 LGALS14Q8TCE9 139 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 ROBO4Q8WZ75 1007 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 SLC7A6Q92536 515 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 TTC9Q92623 222 aa10.54□□□□□ -0.72
PTPRK-216ENST00000524481 CHST11Q9NPF2 352 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms