RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZFP3Q96NJ6 502 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 RBP7Q96R05 134 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 TRIB1Q96RU8 372 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 TEAD3Q99594 435 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 COPS4Q9BT78 406 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 NUAK2Q9H093 628 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 PARPBPQ9NWS1 579 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 PAK1IP1Q9NWT1 392 aaPredicted RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 FOXD3Q9UJU5 478 aaPredicted RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 ZNF835Q9Y2P0 537 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 NOSIPQ9Y314 301 aaKnown RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 A0A087WXM4 84 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 TRIM64CA6NLI5 447 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 B8ZZF3 427 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 DCTN6O00399 190 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 RGS10O43665 173 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 KHDRBS3O75525 346 aaKnown RBP11.57□□□□□ -0.56
CPNE3-205ENST00000522240 GYPBP06028 91 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 CDK1P06493 297 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 YES1P07947 543 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 SMIM18P0DKX4 95 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 CTLA4P16410 223 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 EEF1B2P24534 225 aaKnown RBP11.57□□□□□ -0.56
CPNE3-205ENST00000522240 AGTR1P30556 359 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 SELENOPP49908 381 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 GUSBP1Q15486 140 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 STK11Q15831 433 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 C10orf128Q5T292 105 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 C1orf185Q5T7R7 199 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 RIPPLY2Q5TAB7 128 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 ZNF585AQ6P3V2 769 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 SLC25A47Q6Q0C1 308 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 B3GNT6Q6ZMB0 384 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 PRSS48Q7RTY5 328 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 C20orf196Q8IYI0 205 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 OR6V1Q8N148 313 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 SYT14Q8NB59 555 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 TSPAN14Q8NG11 270 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 LGALS12Q96DT0 336 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 TSSK2Q96PF2 358 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 TM9SF2Q99805 663 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 RHNO1Q9BSD3 238 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 JAM3Q9BX67 310 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 LINC00470Q9BZP3 86 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 TP63Q9H3D4 680 aaPredicted RBP11.57□□□□□ -0.56
CPNE3-205ENST00000522240 MARCH7Q9H992 704 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 AMBNQ9NP70 447 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 FGF20Q9NP95 211 aaPredicted RBP11.57□□□□□ -0.56
CPNE3-205ENST00000522240 B3GAT2Q9NPZ5 323 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 GLTPQ9NZD2 209 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 B9D1Q9UPM9 204 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 EXOGQ9Y2C4 368 aaKnown RBP11.57□□□□□ -0.56
CPNE3-205ENST00000522240 PCDHGB1Q9Y5G3 927 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 BSNQ9UPA5 3926 aa11.57□□□□□ -0.56
CPNE3-205ENST00000522240 BOD1L1Q8NFC6 3051 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 TTLL8A6PVC2 850 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 PTGES3LE9PB15 166 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 PRRG2O14669 202 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 SLC16A7O60669 478 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 MRPL33O75394 65 aaKnown RBP11.56□□□□□ -0.56
CPNE3-205ENST00000522240 UBR5O95071 2799 aaPredicted RBP11.56□□□□□ -0.56
CPNE3-205ENST00000522240 RAB36O95755 333 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 FADS2O95864 444 aaKnown RBP11.56□□□□□ -0.56
CPNE3-205ENST00000522240 CRHP06850 196 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 DCKP27707 260 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 PYCR1P32322 319 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 TUBA4AP68366 448 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 GLO1Q04760 184 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 FMODQ06828 376 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 CARD17Q5XLA6 110 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 TUSC5Q8IXB3 177 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 STX19Q8N4C7 294 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 ST6GALNAC3Q8NDV1 305 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 OR52I1Q8NGK6 324 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 OR6K6Q8NGW6 343 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 OR6N1Q8NGY5 312 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 CNN2Q99439 309 aaKnown RBP11.56□□□□□ -0.56
CPNE3-205ENST00000522240 MRPS26Q9BYN8 205 aaKnown RBP11.56□□□□□ -0.56
CPNE3-205ENST00000522240 ULBP2Q9BZM5 246 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 SLCO5A1Q9H2Y9 848 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 DIMT1Q9UNQ2 313 aaKnown RBP11.56□□□□□ -0.56
CPNE3-205ENST00000522240 SNX5Q9Y5X3 404 aa11.56□□□□□ -0.56
CPNE3-205ENST00000522240 J3QRE1 110 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 ZNHIT1O43257 154 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 SLC19A2O60779 497 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 IGHA1P01876 353 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 MT-ND2P03891 347 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 HRGP04196 525 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 HTR1AP08908 422 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 SBK2P0C263 348 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 GAAP10253 952 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 NTF4P34130 210 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 CDH15P55291 814 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 ACTC1P68032 377 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 ACTA1P68133 377 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 ST3GAL4Q11206 333 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 TBCEQ15813 527 aaPredicted RBP11.55□□□□□ -0.56
CPNE3-205ENST00000522240 RNLSQ5VYX0 342 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 PLXDC2Q6UX71 529 aa11.55□□□□□ -0.56
CPNE3-205ENST00000522240 RPTNQ6XPR3 784 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms