RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 ECSITQ9BQ95 431 aa11.41□□□□□ -0.58
PFDN1-206ENST00000514611 MRPL13Q9BYD1 178 aaKnown RBP11.41□□□□□ -0.58
PFDN1-206ENST00000514611 MS4A5Q9H3V2 200 aa11.41□□□□□ -0.58
PFDN1-206ENST00000514611 RNF121Q9H920 327 aa11.41□□□□□ -0.58
PFDN1-206ENST00000514611 RIMS3Q9UJD0 308 aa11.41□□□□□ -0.58
PFDN1-206ENST00000514611 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 IGKV1D-43A0A0B4J1Z2 117 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 A0A1W2PRG6 482 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 ACADSP16219 412 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 FUT4P22083 530 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 ACHEP22303 614 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 CDAP32320 146 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 RBM34P42696 430 aaKnown RBP11.4□□□□□ -0.58
PFDN1-206ENST00000514611 MAGEB1P43366 347 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 GPR6P46095 362 aaPredicted RBP11.4□□□□□ -0.58
PFDN1-206ENST00000514611 FMODQ06828 376 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 NKPD1Q17RQ9 610 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 TBC1D28Q2M2D7 210 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 SLC36A2Q495M3 483 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 COQ5Q5HYK3 327 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 TMEM53Q6P2H8 277 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 ICA1LQ8NDH6 482 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 CLDND2Q8NHS1 167 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 GTF3AQ92664 365 aaKnown RBP11.4□□□□□ -0.58
PFDN1-206ENST00000514611 HDAC2Q92769 488 aaKnown RBP11.4□□□□□ -0.58
PFDN1-206ENST00000514611 RDH5Q92781 318 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 C1orf159Q96HA4 380 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 ZNF583Q96ND8 569 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 SH3GL1Q99961 368 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 CDH20Q9HBT6 801 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 SAR1AQ9NR31 198 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 INIPQ9NRY2 104 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 ZNF275Q9NSD4 429 aaPredicted RBP11.4□□□□□ -0.58
PFDN1-206ENST00000514611 FGFR1OP2Q9NVK5 253 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 ARGLU1Q9NWB6 273 aaPredicted RBP11.4□□□□□ -0.58
PFDN1-206ENST00000514611 TAAR3PQ9P1P4 343 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 GMPR2Q9P2T1 348 aaKnown RBP11.4□□□□□ -0.58
PFDN1-206ENST00000514611 BAG5Q9UL15 447 aa11.4□□□□□ -0.58
PFDN1-206ENST00000514611 BBIP1A8MTZ0 92 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 FAM220BPB1ANY3 271 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 FAM157AC9JC47 383 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 ENTPD5O75356 428 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 RP2O75695 350 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 SNAP29O95721 258 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 LCKP06239 509 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 MMP7P09237 267 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 TROVE2P10155 538 aaKnown RBP eCLIP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 SAGP10523 405 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 DAP3P51398 398 aaKnown RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 ZNF84P51523 738 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 ZNF133P52736 654 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 ARFIP2P53365 341 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 GLO1Q04760 184 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 TOP3AQ13472 1001 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 NRN1LQ496H8 165 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 CYBRD1Q53TN4 286 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 C10orf128Q5T292 105 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 ARMC4Q5T2S8 1044 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 ERICH5Q6P6B1 374 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 MEX3DQ86XN8 651 aaKnown RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 CLDN22Q8N7P3 220 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 RBM15BQ8NDT2 890 aaKnown RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 C10orf82Q8WW14 230 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 NSMAFQ92636 917 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 NABP1Q96AH0 204 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 TPD52L3Q96J77 140 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 POLR2J2Q9GZM3 115 aaKnown RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 POLR2J3Q9H1A7 115 aaKnown RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 LPAR2Q9HBW0 351 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 TMEFF2Q9UIK5 374 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-206ENST00000514611 UGT2A1Q9Y4X1 527 aa11.39□□□□□ -0.59
PFDN1-206ENST00000514611 IGLV3-9A0A075B6K5 115 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 LOC100653049A0A140TA62 436 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 SLC22A23A1A5C7 686 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 PPIHO43447 177 aaKnown RBP11.38□□□□□ -0.59
PFDN1-206ENST00000514611 CDC14BO60729 498 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 KRT34O76011 436 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 IGF2P01344 180 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 VIMP08670 466 aaKnown RBP11.38□□□□□ -0.59
PFDN1-206ENST00000514611 TSPAN19P0C672 248 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 ZNF250P15622 560 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 SRP14P37108 136 aaKnown RBP11.38□□□□□ -0.59
PFDN1-206ENST00000514611 DVL1P1P54792 670 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-206ENST00000514611 KLF3P57682 345 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-206ENST00000514611 CCL8P80075 99 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 HSF2Q03933 536 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 CD47Q08722 323 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 LAPTM4AQ15012 233 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 HDDC2Q7Z4H3 204 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 IGFN1Q86VF2 1251 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 MICU2Q8IYU8 434 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 CPEB3Q8NE35 698 aaKnown RBP11.38□□□□□ -0.59
PFDN1-206ENST00000514611 SYNPRQ8TBG9 265 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 LIPHQ8WWY8 451 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 NMD3Q96D46 503 aaKnown RBP11.38□□□□□ -0.59
PFDN1-206ENST00000514611 RACGAP1Q9H0H5 632 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 C1orf198Q9H425 327 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 ZNF346Q9UL40 294 aaKnown RBP11.38□□□□□ -0.59
PFDN1-206ENST00000514611 A4GNTQ9UNA3 340 aa11.38□□□□□ -0.59
PFDN1-206ENST00000514611 MED31Q9Y3C7 131 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms