RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 KIF18AQ8NI77 898 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 RHEBL1Q8TAI7 183 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 CNOT9Q92600 299 aaKnown RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 RDH5Q92781 318 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 AURKBQ96GD4 344 aaPredicted RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 CPNE1Q99829 537 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 KCNS3Q9BQ31 491 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 THUMPD3Q9BV44 507 aaKnown RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 MARCH7Q9H992 704 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 SLC52A3Q9NQ40 469 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 DCAF16Q9NXF7 216 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 VPS29Q9UBQ0 182 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 UPB1Q9UBR1 384 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 SLC25A10Q9UBX3 287 aaPredicted RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 MRTO4Q9UKD2 239 aaKnown RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 NUP50Q9UKX7 468 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 DHDHQ9UQ10 334 aa4.03□□□□□ -1.76
HTT-211ENST00000513326 POLR3HQ9Y535 204 aaPredicted RBP4.03□□□□□ -1.76
HTT-211ENST00000513326 ARPC4-TTLL3A0A0A6YYG9 625 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 SYCE1LA8MT33 242 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 C17orf100A8MU93 164 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 TEX22C9J3V5 150 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 TRAPPC2LH3BP13 241 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 CCDC188H7C350 402 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 M0R233 179 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 SCAMP2O15127 329 aaKnown RBP4.02□□□□□ -1.77
HTT-211ENST00000513326 SYNGR3O43761 229 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 ZNF500O60304 480 aaPredicted RBP4.02□□□□□ -1.77
HTT-211ENST00000513326 RSL1D1O76021 490 aaKnown RBP4.02□□□□□ -1.77
HTT-211ENST00000513326 SEC31AO94979 1220 aaKnown RBP4.02□□□□□ -1.77
HTT-211ENST00000513326 IGKV3-15P01624 115 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 LCKP06239 509 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 ERCC1P07992 297 aaPredicted RBP4.02□□□□□ -1.77
HTT-211ENST00000513326 CHRM4P08173 479 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 ANXA4P09525 319 aaPredicted RBP4.02□□□□□ -1.77
HTT-211ENST00000513326 PRPS2P11908 318 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 HPGDP15428 266 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 NTSP30990 170 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 FOXA1P55317 472 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 OR2B6P58173 313 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 H3F3AP84243 136 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 SLC17A1Q14916 467 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 HEPACAMQ14CZ8 416 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 ARMCX4Q5H9R4 360 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 TMEM255AQ5JRV8 349 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 PDZK1Q5T2W1 519 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 C16orf87Q6PH81 154 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 MDP1Q86V88 176 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 MISPQ8IVT2 679 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 CTAGE3PQ8IX95 158 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 SCAIQ8N9R8 606 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 SETD9Q8NE22 299 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 OR4F15Q8NGB8 312 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 PIGXQ8TBF5 258 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 RAB40AQ8WXH6 277 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 DPF1Q92782 380 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 SLC25A28Q96A46 364 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 LRRC39Q96DD0 335 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 EGLN2Q96KS0 407 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 C7orf26Q96N11 449 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 MS4A4EQ96PG1 132 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 IFT27Q9BW83 186 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 CCDC106Q9BWC9 280 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 SHCBP1LQ9BZQ2 653 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 TMPRSS5Q9H3S3 457 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 BRF2Q9HAW0 419 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 C3orf14Q9HBI5 128 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 MOV10Q9HCE1 1003 aaKnown RBP4.02□□□□□ -1.77
HTT-211ENST00000513326 CTPS2Q9NRF8 586 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 SIRT3Q9NTG7 399 aaPredicted RBP4.02□□□□□ -1.77
HTT-211ENST00000513326 NSMCE4AQ9NXX6 385 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 PLEK2Q9NYT0 353 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 LEF1Q9UJU2 399 aaPredicted RBP4.02□□□□□ -1.77
HTT-211ENST00000513326 WIPI2Q9Y4P8 454 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 TIMM22Q9Y584 194 aa4.02□□□□□ -1.77
HTT-211ENST00000513326 SACSQ9NZJ4 4579 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 A0A096LPK6 155 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 TMEM72A0PK05 275 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 CLPSL1A2RUU4 121 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 DPPA5A6NC42 116 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 OR6C68A6NDL8 312 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 CXorf65A6NEN9 183 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 CLDN24A6NM45 220 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 GTPBP1O00178 669 aaKnown RBP4.01□□□□□ -1.77
HTT-211ENST00000513326 PGRMC1O00264 195 aaKnown RBP4.01□□□□□ -1.77
HTT-211ENST00000513326 AP3D1O14617 1153 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 TIMM23O14925 209 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 KLHL2O95198 593 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 CLPTM1O96005 669 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 ALOX5P09917 674 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 UBTFL6P0CB48 400 aaPredicted RBP4.01□□□□□ -1.77
HTT-211ENST00000513326 UBL4AP11441 157 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 CRABP2P29373 138 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 P2RY4P51582 365 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 TMEM33P57088 247 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 UBE2NP61088 152 aaKnown RBP4.01□□□□□ -1.77
HTT-211ENST00000513326 ERVS71-1P61550 626 aa4.01□□□□□ -1.77
HTT-211ENST00000513326 CSNK2A1P68400 391 aaPredicted RBP4.01□□□□□ -1.77
HTT-211ENST00000513326 CCL8P80075 99 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms