RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CSDC2Q9Y534 153 aaKnown RBP2.17□□□□□ -2.06
TRAPPC11-207ENST00000511409 CEMIPQ8WUJ3 1361 aa2.17□□□□□ -2.06
TRAPPC11-207ENST00000511409 CNTNAP1P78357 1384 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 PLAC8L1A1L4L8 177 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 SMCO3A2RU48 225 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 SMCO2A6NFE2 343 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 AIM2O14862 343 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 RNF13O43567 381 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 SNAI2O43623 268 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 IGLV2-23P01705 113 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 FABP3P05413 133 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 CT62P0C5K7 136 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 GDI1P31150 447 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 ZNF136P52737 540 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 ACLYP53396 1101 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 SLC7A9P82251 487 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 TWF1Q12792 350 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 TCP10Q12799 353 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 EIF4EBP2Q13542 120 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 PTGES3Q15185 160 aaKnown RBP2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 ANKRD26P1Q6NSI1 321 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 ZFP2Q6ZN57 461 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 STRADAQ7RTN6 431 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 PDIK1LQ8N165 341 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 OR56B2PQ8NGI1 322 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 ZNF596Q8TC21 504 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 SLC7A13Q8TCU3 470 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 GPR151Q8TDV0 419 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 ZFP90Q8TF47 636 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 STARD8Q92502 1023 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 EXOSC8Q96B26 276 aaKnown RBP2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 FAM3DQ96BQ1 224 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 RASD2Q96D21 266 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 PIK3IP1Q96FE7 263 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 NUP58Q9BVL2 599 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 ILKAPQ9H0C8 392 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 TPK1Q9H3S4 243 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 CWH43Q9H720 699 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 KCNJ16Q9NPI9 418 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 RBAKQ9NYW8 714 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 OR12D3Q9UGF7 316 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 LSM7Q9UK45 103 aaKnown RBP2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 PSG11Q9UQ72 335 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 GOLT1BQ9Y3E0 138 aa2.16□□□□□ -2.06
TRAPPC11-207ENST00000511409 IGKV2D-24A0A075B6R9 120 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF716A6NP11 495 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 LRRIQ3A6PVS8 624 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 CDC7O00311 574 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ANGPTL7O43827 346 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 EEDO75530 441 aaKnown RBP2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 MED6O75586 246 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 AIFM1O95831 613 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ANXA5P08758 320 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF735P0CB33 412 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 PRPS2P11908 318 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 MAGP20916 626 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 CCNHP51946 323 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 MNAT1P51948 309 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 LRRC74AQ0VAA2 488 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 DEFB116Q30KQ4 102 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 TFDP3Q5H9I0 405 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 TMEM255AQ5JRV8 349 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 CCNJQ5T5M9 372 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 HES5Q5TA89 166 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 SLC8B1Q6J4K2 584 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 LYPD2Q6UXB3 125 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZYG11AQ6WRX3 759 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF493Q6ZR52 646 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 NCCRP1Q6ZVX7 275 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ABHD13Q7L211 337 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 Q8N976 141 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 OR5B3Q8NH48 314 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF502Q8TBZ5 544 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 RNF139Q8WU17 664 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 KIFAP3Q92845 792 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 CCDC77Q9BR77 488 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 MRPL37Q9BZE1 423 aaKnown RBP2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 FAM192AQ9GZU8 254 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 PATZ1Q9HBE1 687 aaKnown RBP2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 NMRK1Q9NWW6 199 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF629Q9UEG4 869 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 TBX21Q9UL17 535 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ING4Q9UNL4 249 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 MRPS18BQ9Y676 258 aaKnown RBP2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 ASTN1O14525 1302 aa2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 CENPJQ9HC77 1338 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC11-207ENST00000511409 TRAV39A0A0B4J263 110 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF816-ZNF321PA0A0X1KG74 233 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 TRIM64CA6NLI5 447 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 CCDC169A6NNP5 214 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 INS-IGF2F8WCM5 200 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 AP3B1O00203 1094 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 RAB29O14966 203 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 GABARAPO95166 117 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 UTS2O95399 124 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 C6orf47O95873 294 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 CRYGBP07316 175 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 FOLR1P15328 257 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 HRH1P35367 487 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms