RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 OSBPL10Q9BXB5 764 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 C8orf33Q9H7E9 229 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 CCNB1IP1Q9NPC3 277 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 STOX2Q9P2F5 926 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 MTRF1LQ9UGC7 380 aaKnown RBP3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 GOLT1BQ9Y3E0 138 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 SAR1BQ9Y6B6 198 aa3.83□□□□□ -1.8
HMGB1P47-201ENST00000511281 TNIKQ9UKE5 1360 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 ARPC4-TTLL3A0A0A6YYG9 625 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 NPIPB7O75200 414 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 CLDN11O75508 207 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 AQP8O94778 261 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 HLA-HP01893 362 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 CT45A6P0DMU7 189 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 CT45A5P0DMU8 189 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 CT45A7P0DMV0 189 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 HPGDP15428 266 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 HTR1EP28566 365 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 RORCP51449 518 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 CRISP1P54107 249 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 FGF8P55075 233 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 NUP107P57740 925 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 LYZP61626 148 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 SLC25A11Q02978 314 aaKnown RBP3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 ORC2Q13416 577 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 CT45A1Q5HYN5 189 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZNF544Q6NX49 715 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 H2AFVQ71UI9 128 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 TMEM61Q8N0U2 210 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 C11orf42Q8N5U0 333 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 PRELID2Q8N945 189 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 NPBQ8NG41 125 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 OR52E5Q8NH55 327 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 OR5K2Q8NHB8 316 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 CT45A3Q8NHU0 189 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZNF502Q8TBZ5 544 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 HES7Q9BYE0 225 aa3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 ACTR3CQ9C0K3 210 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 EML4Q9HC35 981 aaKnown RBP3.82□□□□□ -1.8
HMGB1P47-201ENST00000511281 NISCHQ9Y2I1 1504 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 ARHGAP23Q9P227 1491 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 KIF27Q86VH2 1401 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 MAPK8IP3Q9UPT6 1336 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 LYRM9A8MSI8 78 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 H0YHG0 523 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 TEX46H3BTG2 121 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 M0R3G1 203 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 HDAC3O15379 428 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 AIREO43918 545 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 DCNP07585 359 aaKnown RBP3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 CSF3P09919 207 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 SMIM10L1P0DMW3 83 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 CTRB1P17538 263 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 TUBG1P23258 451 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 PRPS1P60891 318 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 ACTA2P62736 377 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 ACTG2P63267 376 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 ACTC1P68032 377 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 ACTA1P68133 377 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 ECH1Q13011 328 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 AQP6Q13520 282 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 TRAM2Q15035 370 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 IL17AQ16552 155 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 SGCAQ16586 387 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZNF239Q16600 458 aaKnown RBP3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 LRRC10Q5BKY1 277 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 H3F3CQ6NXT2 135 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 COX15Q7KZN9 410 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 CMC1Q7Z7K0 106 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 LINC00523Q86TU6 105 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 C20orf203Q8NBC4 194 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 OR4F15Q8NGB8 312 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 OR56A4Q8NGH8 313 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 NDRG1Q92597 394 aaKnown RBP3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 MYDGFQ969H8 173 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 MARC2Q969Z3 335 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 ANKRD9Q96BM1 317 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 SMIM10Q96HG1 83 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 UCK2Q9BZX2 261 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZYG11BQ9C0D3 744 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 TUBG2Q9NRH3 451 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 RHBDD3Q9Y3P4 386 aa3.81□□□□□ -1.8
HMGB1P47-201ENST00000511281 IGKV3D-20A0A0C4DH25 116 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 A0A0J9YYE9 177 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZNF816-ZNF321PA0A0X1KG74 233 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 A0A1W2PRD5 423 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZNF701M0R085 212 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 PEX7O00628 323 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 CCNB2O95067 398 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 CD160O95971 181 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 TRBC1P01850 177 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 UBCP0CG48 685 aaKnown RBP3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 U2AF2P26368 475 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 GPX4P36969 197 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 TIMM10P62072 90 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 CLINT1Q14677 625 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 TGIF2LYQ8IUE0 185 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 OR2A1Q8NGT9 310 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 FANK1Q8TC84 345 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 SDR42E1Q8WUS8 393 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms