RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 FOXL2P58012 376 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 DAOAP59103 153 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 SSBP1Q04837 148 aaKnown RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 TWF1Q12792 350 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 SRSF5Q13243 272 aaKnown RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 NAE1Q13564 534 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 ARHGAP19Q14CB8 494 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 KIAA0040Q15053 153 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 PTGES3Q15185 160 aaKnown RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF630Q2M218 657 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM174BQ3ZCQ3 159 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 CHRFAM7AQ494W8 412 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 SOWAHCQ53LP3 525 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 ACER2Q5QJU3 275 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 TMEM244Q5VVB8 128 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 LIPNQ5VXI9 398 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 LIPKQ5VXJ0 399 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 OLFML2AQ68BL7 652 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF660Q6AZW8 331 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 FRMPD2BQ6IN97 320 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 RAB12Q6IQ22 244 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 HEPHL1Q6MZM0 1159 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 MED27Q6P2C8 311 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC22A25Q6T423 547 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 ATRAIDQ6UW56 229 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 CES3Q6UWW8 571 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 SSX6Q7RTT6 188 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 KLBQ86Z14 1044 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 KCNRGQ8N5I3 272 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM86B1Q8N7N1 296 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 SYT14Q8NB59 555 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 OR9Q2Q8NGE9 314 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 OR5T3Q8NGG3 340 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 OR56B1Q8NGI3 324 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 OR4Q3Q8NH05 313 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 OR4K15Q8NH41 348 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 C2CD4CQ8TF44 421 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 SMIM4Q8WVI0 70 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 PHYHIPQ92561 330 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 MED8Q96G25 268 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 BSCL2Q96G97 398 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC41A3Q96GZ6 507 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 C12orf42Q96LP6 360 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF558Q96NG5 402 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 ATOH8Q96SQ7 321 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 FUZQ9BT04 418 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 NDUFAF3Q9BU61 184 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 TKTL2Q9H0I9 626 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 OPN3Q9H1Y3 402 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 TUBB1Q9H4B7 451 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 RNF167Q9H6Y7 350 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 NOX3Q9HBY0 568 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 NT5MQ9NPB1 228 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 B3GAT2Q9NPZ5 323 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 RNF146Q9NTX7 359 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM120CQ9NX05 1096 aaKnown RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF226Q9NYT6 803 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 OPN4Q9UHM6 478 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 SH3BGRL2Q9UJC5 107 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 DHRS7Q9Y394 339 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 FBXO7Q9Y3I1 522 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 WIF1Q9Y5W5 379 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 CHD6Q8TD26 2715 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 EP300Q09472 2414 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 TRANK1O15050 2925 aa4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 MAP1BP46821 2468 aaKnown RBP4.11□□□□□ -1.75
PDLIM5-211ENST00000508531 PLXNA3P51805 1871 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TBC1D3DA0A087WVF3 549 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TBC1D3IA0A087WXS9 549 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 FXYD6-FXYD2A0A087WZ82 144 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TBC1D3EA0A087X179 549 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TBC1D3KA0A087X1G2 549 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 MEX3AA1L020 520 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TBC1D3FA6NER0 549 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 COLCA2A8K830 154 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TBC1D3LB9A6J9 549 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 GABARAPH6UMI1 98 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 H7C417 338 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 M0R143 59 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 GPR31O00270 319 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 FAAHO00519 579 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 MFNGO00587 321 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 PPP1R2P9O14990 202 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SIGLEC5O15389 551 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 FGF16O43320 207 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 EEF1E1O43324 174 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 MED6O75586 246 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 GRAP2O75791 330 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ARL6IP5O75915 188 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 BEST1O76090 585 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TOXO94900 526 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 PDGFBP01127 241 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ICAM1P05362 532 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 CRHP06850 196 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 HCKP08631 526 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 HOXB5P09067 269 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 QDPRP09417 244 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ACP2P11117 423 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC25A4P12235 298 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 PAX1P15863 534 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms