RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RELL2Q8NC24 303 aaPredicted RBP12.51□□□□□ -0.41
RNF4-208ENST00000507247 OR51L1Q8NGJ5 315 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 NSMAFQ92636 917 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 CCDC120Q96HB5 630 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 ZNF582Q96NG8 517 aaPredicted RBP12.51□□□□□ -0.41
RNF4-208ENST00000507247 FOXN4Q96NZ1 517 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 RBP7Q96R05 134 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 ULBP2Q9BZM5 246 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 OR51V1Q9H2C8 321 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 RERGLQ9H628 205 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 GPR35Q9HC97 309 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 SRA1Q9HD15 236 aaKnown RBP12.51□□□□□ -0.41
RNF4-208ENST00000507247 UBAP1Q9NZ09 502 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 PROCRQ9UNN8 238 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 B9D1Q9UPM9 204 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 FKBP7Q9Y680 259 aa12.51□□□□□ -0.41
RNF4-208ENST00000507247 A0A1B0GUH1 482 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 OR6C65A6NJZ3 312 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 MPZL2O60487 215 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 ENTPD6O75354 484 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 SMNDC1O75940 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
RNF4-208ENST00000507247 GPANK1O95872 356 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 CD8BP10966 210 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 BMP5P22003 454 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 FMO3P31513 532 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 OPRM1P35372 400 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 ROR2Q01974 943 aaKnown RBP12.5□□□□□ -0.41
RNF4-208ENST00000507247 FAPQ12884 760 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 CDK5R2Q13319 367 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 APOFQ13790 326 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 OCLNQ16625 522 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 SMN1Q16637 294 aaKnown RBP12.5□□□□□ -0.41
RNF4-208ENST00000507247 CEACAM16Q2WEN9 425 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 KLHL12Q53G59 568 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 SLC25A30Q5SVS4 291 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 C10orf128Q5T292 105 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 LINC01590Q5TEZ4 76 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 NXNL2Q5VZ03 156 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 FBXW9Q5XUX1 488 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 LYPD4Q6UWN0 246 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 UBE2J2Q8N2K1 259 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 FNDC8Q8TC99 324 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 KISS1RQ969F8 398 aaPredicted RBP12.5□□□□□ -0.41
RNF4-208ENST00000507247 RACGAP1Q9H0H5 632 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 Q9H521 79 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 CRLF2Q9HC73 371 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 B3GAT2Q9NPZ5 323 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 UPB1Q9UBR1 384 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 MALT1Q9UDY8 824 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 COA3Q9Y2R0 106 aaPredicted RBP12.5□□□□□ -0.41
RNF4-208ENST00000507247 UGT2A1Q9Y4X1 527 aa12.5□□□□□ -0.41
RNF4-208ENST00000507247 PRRC2CQ9Y520 2896 aaKnown RBP12.5□□□□□ -0.41
RNF4-208ENST00000507247 RPL36A-HNRNPH2H7BZ11 118 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 PRODHO43272 600 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 DHHO43323 396 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 KHDRBS3O75525 346 aaKnown RBP12.49□□□□□ -0.41
RNF4-208ENST00000507247 KRT33AO76009 404 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 ITGA5P08648 1049 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 NR2C1P13056 603 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 CRABP1P29762 137 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 NUDT6P53370 316 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 C9orf135Q5VTT2 229 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 B3GLCTQ6Y288 498 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 GID4Q8IVV7 300 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 PROKR2Q8NFJ6 384 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 OR2T4Q8NH00 348 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 HTRA1Q92743 480 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 RBM24Q9BX46 236 aaKnown RBP12.49□□□□□ -0.41
RNF4-208ENST00000507247 CLN6Q9NWW5 311 aa12.49□□□□□ -0.41
RNF4-208ENST00000507247 ZNF629Q9UEG4 869 aaPredicted RBP12.49□□□□□ -0.41
RNF4-208ENST00000507247 NBASA2RRP1 2371 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 A0A1W2PPL8 197 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 ZNF587BE7ETH6 402 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 SEC14L2O76054 403 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 GLCEO94923 617 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 SCG5P05408 212 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 GAAP10253 952 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 IGHV1-2P23083 117 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 GSTT1P30711 240 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 CDAP32320 146 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 CDH11P55287 796 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 RPS7P62081 194 aaKnown RBP12.48□□□□□ -0.41
RNF4-208ENST00000507247 TEKQ02763 1124 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 MEDAGQ5VYS4 303 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 OTPQ5XKR4 325 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 KRT80Q6KB66 452 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 DNM1P34Q6PK57 102 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 ZNF474Q6S9Z5 364 aaPredicted RBP12.48□□□□□ -0.41
RNF4-208ENST00000507247 Q6ZT83 130 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 FOXL2NBQ6ZUU3 175 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 MEPCEQ7L2J0 689 aaKnown RBP12.48□□□□□ -0.41
RNF4-208ENST00000507247 LUZP2Q86TE4 346 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 GABRG1Q8N1C3 465 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 ZNF511Q8NB15 262 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 ZMYND19Q96E35 227 aaPredicted RBP12.48□□□□□ -0.41
RNF4-208ENST00000507247 PIGMQ9H3S5 423 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 AMBNQ9NP70 447 aa12.48□□□□□ -0.41
RNF4-208ENST00000507247 H2AFY2Q9P0M6 372 aaPredicted RBP12.48□□□□□ -0.41
RNF4-208ENST00000507247 PCNX1Q96RV3 2341 aa12.47□□□□□ -0.41
RNF4-208ENST00000507247 TVP23AA6NH52 213 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms