RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 H0YHG0 523 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-210ENST00000506767 IL32P24001 234 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 EPHA2P29317 976 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 POLR2IP36954 125 aaKnown RBP11.26□□□□□ -0.61
TCOF1-210ENST00000506767 NPRL3Q12980 569 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 RIPK1Q13546 671 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 NRN1LQ496H8 165 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 TIMM23BQ5SRD1 257 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 C1QTNF12Q5T7M4 302 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 OGFRL1Q5TC84 451 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-210ENST00000506767 TMEM236Q5W0B7 351 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 LPCAT4Q643R3 524 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 LEG1Q6P5S2 330 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 ANKRD16Q6P6B7 361 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 FOXL2NBQ6ZUU3 175 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 P2RY8Q86VZ1 359 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 JAZF1Q86VZ6 243 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 C17orf78Q8N4C9 275 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 WDR31Q8NA23 367 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 LINC01560Q8TB33 94 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 FOXB1Q99853 325 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 SYT4Q9H2B2 425 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 RNPEPL1Q9HAU8 725 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 CMC2Q9NRP2 79 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 PLEKHB1Q9UF11 243 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-210ENST00000506767 NDRG3Q9UGV2 375 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 KLHL21Q9UJP4 597 aa11.26□□□□□ -0.61
TCOF1-210ENST00000506767 TUBAL3A6NHL2 446 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 DCTN6O00399 190 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 SURF4O15260 269 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 RENP00797 406 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 HMGN1P05114 100 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 THBDP07204 575 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 CTLA4P16410 223 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 CDH2P19022 906 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-210ENST00000506767 KIR2DL3P43628 341 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 ZNF84P51523 738 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
TCOF1-210ENST00000506767 SLC34A1Q06495 639 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 TRIP10Q15642 601 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 TAB1Q15750 504 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 ETFDHQ16134 617 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 TBRG1Q3YBR2 411 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 SLX4IPQ5VYV7 408 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 SEZ6L2Q6UXD5 910 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 MEX3BQ6ZN04 569 aaKnown RBP11.25□□□□□ -0.61
TCOF1-210ENST00000506767 ZBTB46Q86UZ6 589 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 OR6V1Q8N148 313 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 SLC37A3Q8NCC5 494 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 SDR9C7Q8NEX9 313 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 HSD17B8Q92506 261 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 DACH2Q96NX9 599 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 NMNAT2Q9BZQ4 307 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 NUAK2Q9H093 628 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 C8orf4Q9NR00 106 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 SLC17A5Q9NRA2 495 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 TMEM38BQ9NVV0 291 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 B9D1Q9UPM9 204 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 SLC25A15Q9Y619 301 aa11.25□□□□□ -0.61
TCOF1-210ENST00000506767 SPTAN1Q13813 2472 aaKnown RBP11.24□□□□□ -0.61
TCOF1-210ENST00000506767 ARPC4-TTLL3A0A0A6YYG9 625 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 IGLV1-36A0A0B4J1U3 117 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 SH3D21A4FU49 640 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 DLGAP1O14490 977 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 SLC16A7O60669 478 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 KHDRBS3O75525 346 aaKnown RBP11.24□□□□□ -0.61
TCOF1-210ENST00000506767 IFNGP01579 166 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 EPXP11678 715 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 B4GALT1P15291 398 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 COL8A1P27658 744 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 PEX2P28328 305 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 CRABP1P29762 137 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 RAD23AP54725 363 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 EFNB1P98172 346 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 CRMP1Q14194 572 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 HIKESHIQ53FT3 197 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 C12orf73Q69YU5 71 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 ZNF813Q6ZN06 617 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 SSX8Q7RTT4 187 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 SLC22A24Q8N4F4 322 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 PACRGLQ8N7B6 248 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 FAM222BQ8WU58 562 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 NSMAFQ92636 917 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 NABP1Q96AH0 204 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 TSSK2Q96PF2 358 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 GRIP2Q9C0E4 1043 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 RACGAP1Q9H0H5 632 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 SLC24A3Q9HC58 644 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 OBP2BQ9NPH6 170 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 ZNF224Q9NZL3 707 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 CRIM1Q9NZV1 1036 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 AMDHD2Q9Y303 409 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 RRP15Q9Y3B9 282 aaKnown RBP11.24□□□□□ -0.61
TCOF1-210ENST00000506767 FKBP7Q9Y680 259 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 CACNA1DQ01668 2161 aa11.24□□□□□ -0.61
TCOF1-210ENST00000506767 USP9YO00507 2555 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-210ENST00000506767 A0A096LPE4 126 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 A0A1W2PPZ6 126 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 RIIAD1A6NNX1 92 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms