RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TRAP1Q12931 704 aaKnown RBP11.12□□□□□ -0.63
HSPG2-213ENST00000498495 SLC36A2Q495M3 483 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 NRN1LQ496H8 165 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 FAM98BQ52LJ0 330 aaKnown RBP11.12□□□□□ -0.63
HSPG2-213ENST00000498495 C10orf128Q5T292 105 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 SLC25A47Q6Q0C1 308 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 SLC16A14Q7RTX9 510 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 YTHDF3Q7Z739 585 aaKnown RBP11.12□□□□□ -0.63
HSPG2-213ENST00000498495 DPPA2Q7Z7J5 298 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 ZER1Q7Z7L7 766 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 DTX2Q86UW9 622 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 ARIH2OSQ8N7S6 290 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 NSMAFQ92636 917 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 CCDC124Q96CT7 223 aaKnown RBP11.12□□□□□ -0.63
HSPG2-213ENST00000498495 RSRC1Q96IZ7 334 aaKnown RBP11.12□□□□□ -0.63
HSPG2-213ENST00000498495 SH3GL3Q99963 347 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 BTBD10Q9BSF8 475 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 FUZQ9BT04 418 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 MAGIXQ9H6Y5 334 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 SEC61A2Q9H9S3 476 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 SMURF2Q9HAU4 748 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF224Q9NZL3 707 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 FBXL3Q9UKT7 428 aa11.12□□□□□ -0.63
HSPG2-213ENST00000498495 HRNRQ86YZ3 2850 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-213ENST00000498495 TNFRSF11BO00300 401 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 XKRYO14609 159 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 SLC2A10O95528 541 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 NPR2P20594 1047 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 CALCRP30988 508 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 LIMS1P48059 325 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 HMGA2P52926 109 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 FMODQ06828 376 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 RAB39AQ14964 217 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 SGCAQ16586 387 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 TMEM53Q6P2H8 277 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 VHLLQ6RSH7 139 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 MYPOPQ86VE0 399 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-213ENST00000498495 KRTAP1-3Q8IUG1 177 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 LRRC18Q8N456 261 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF519Q8TB69 540 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 GNPDA2Q8TDQ7 276 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 HTRA1Q92743 480 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 NMD3Q96D46 503 aaKnown RBP11.11□□□□□ -0.63
HSPG2-213ENST00000498495 MS4A3Q96HJ5 214 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 Q96M85 177 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF75AQ96N20 296 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 TRIM15Q9C019 465 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 SIAEQ9HAT2 523 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 CA10Q9NS85 328 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 IL20RAQ9UHF4 553 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 ADAM18Q9Y3Q7 739 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 SPEF1Q9Y4P9 236 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 PMF1-BGLAPU3KQ54 211 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 MYO9AB2RTY4 2548 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 CADP27708 2225 aa11.11□□□□□ -0.63
HSPG2-213ENST00000498495 IGKV1D-43A0A0B4J1Z2 117 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 IGHV2OR16-5A0A0B4J2B6 119 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 ACOT8O14734 319 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 AHCYL1O43865 530 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 DNAJC8O75937 253 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-213ENST00000498495 SERPINA5P05154 406 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF14P17017 642 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF26P17031 533 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-213ENST00000498495 CDAP32320 146 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 SERPINF1P36955 418 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 MAGEA2P43356 314 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 RPS6KA3P51812 740 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 MRPS34P82930 218 aaKnown RBP11.1□□□□□ -0.63
HSPG2-213ENST00000498495 PLP2Q04941 152 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 RAB35Q15286 201 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 RFX4Q33E94 735 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 GPR139Q6DWJ6 353 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 C1orf94Q6P1W5 598 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 SMARCD3Q6STE5 483 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 DPY19L2P2Q6ZN68 376 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 LINC00471Q8N535 108 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 CLDN22Q8N7P3 220 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 NUP37Q8NFH4 326 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 SLC7A6OSQ96CW6 309 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-213ENST00000498495 FBXO17Q96EF6 278 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 Q96MF0 132 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF570Q96NI8 536 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 GPA33Q99795 319 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 CACNG6Q9BXT2 260 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 NOX3Q9HBY0 568 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 NRIP3Q9NQ35 241 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 IER3IP1Q9Y5U9 82 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 ROS1P08922 2347 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 CCDC168Q8NDH2 2452 aa11.1□□□□□ -0.63
HSPG2-213ENST00000498495 AQP12BA6NM10 295 aa11.09□□□□□ -0.63
HSPG2-213ENST00000498495 GSC2O15499 205 aa11.09□□□□□ -0.63
HSPG2-213ENST00000498495 PTHP01270 115 aa11.09□□□□□ -0.63
HSPG2-213ENST00000498495 OR4A8P0C604 315 aa11.09□□□□□ -0.63
HSPG2-213ENST00000498495 RAP2AP10114 183 aa11.09□□□□□ -0.63
HSPG2-213ENST00000498495 ZNF35P13682 527 aa11.09□□□□□ -0.63
HSPG2-213ENST00000498495 FPR3P25089 353 aa11.09□□□□□ -0.63
HSPG2-213ENST00000498495 SDHAP31040 664 aa11.09□□□□□ -0.63
HSPG2-213ENST00000498495 RASSF2P50749 326 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms