RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ENPP6Q6UWR7 440 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 NECAP1Q8NC96 275 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 L3HYPDHQ96EM0 354 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 TTC25Q96NG3 672 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 RPRD1AQ96P16 312 aaPredicted RBP1.62□□□□□ -2.15
SMC4-227ENST00000497984 COPS8Q99627 209 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 RNF5Q99942 180 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 TMEM59Q9BXS4 323 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 SYNDIG1Q9H7V2 258 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 GPATCH8Q9UKJ3 1502 aaKnown RBP1.61□□□□□ -2.15
SMC4-227ENST00000497984 ADAMTS13Q76LX8 1427 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 TRAV26-1A0A087WT03 109 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 ZNF850A8MQ14 1090 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 A8MUU9 505 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 CCL21O00585 134 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 MAGEB3O15480 346 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 CCNKO75909 580 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 GABARAPO95166 117 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 RAB3DO95716 219 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 FAM78AQ5JUQ0 283 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 PDZK1Q5T2W1 519 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 RAET1LQ5VY80 246 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 KDM7AQ6ZMT4 941 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 TEX43Q6ZNM6 134 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 LHFPL3Q86UP9 236 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 PUSL1Q8N0Z8 303 aaKnown RBP1.61□□□□□ -2.15
SMC4-227ENST00000497984 LINC00304Q8N9R0 145 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 RNF139Q8WU17 664 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 TMEM54Q969K7 222 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.61□□□□□ -2.152e-13■■■■■ 56.3
SMC4-227ENST00000497984 HSFY1Q96LI6 401 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 ZNF681Q96N22 645 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 ZNF382Q96SR6 550 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 P2RX4Q99571 388 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 FOXC2Q99958 501 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 SULT4A1Q9BR01 284 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 PPA2Q9H2U2 334 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 TUBGCP6Q96RT7 1819 aa1.61□□□□□ -2.15
SMC4-227ENST00000497984 FBN3Q75N90 2809 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 SGK1O00141 431 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 SOX15O60248 233 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 EIF3GO75821 320 aaKnown RBP eCLIP1.6□□□□□ -2.158e-13■■■■■ 59.2
SMC4-227ENST00000497984 IL4P05112 153 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 RDXP35241 583 aaKnown RBP1.6□□□□□ -2.15
SMC4-227ENST00000497984 HRH1P35367 487 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 CDKN2BP42772 138 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 ATP1B3P54709 279 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 FBXW4P57775 412 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 POLR2FP61218 127 aaKnown RBP1.6□□□□□ -2.15
SMC4-227ENST00000497984 MEF2BQ02080 365 aaPredicted RBP1.6□□□□□ -2.15
SMC4-227ENST00000497984 PDK3Q15120 406 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 IRF4Q15306 451 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 LGI3Q8N145 548 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 OR2G2Q8NGZ5 317 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 OR2T3Q8NH03 318 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 SEH1LQ96EE3 360 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 MED8Q96G25 268 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 RARRES2Q99969 163 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 SLC25A2Q9BXI2 301 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 NMRAL1Q9HBL8 299 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 PALMDQ9NP74 551 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 DDX19AQ9NUU7 478 aaKnown RBP1.6□□□□□ -2.15
SMC4-227ENST00000497984 CGNQ9P2M7 1197 aaKnown RBP1.6□□□□□ -2.15
SMC4-227ENST00000497984 EPS15L1Q9UBC2 864 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 ADAM28Q9UKQ2 775 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 KIAA1257Q9ULG3 409 aa1.6□□□□□ -2.15
SMC4-227ENST00000497984 BRWD3Q6RI45 1802 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 COL27A1Q8IZC6 1860 aaPredicted RBP1.59□□□□□ -2.15
SMC4-227ENST00000497984 A0A0U1RQV1 116 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 HIDE1A8MVS5 230 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 BPY2O14599 106 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 ERLIN2O94905 339 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 YIF1AO95070 293 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 CDRT1O95170 752 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 CCNE2O96020 404 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 FABP3P05413 133 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 OR56A5P0C7T3 313 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 ATP5C1P36542 298 aaKnown RBP1.59□□□□□ -2.15
SMC4-227ENST00000497984 OPRK1P41145 380 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 EPS15P42566 896 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 RORCP51449 518 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 CDH4P55283 916 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 FGL1Q08830 312 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 CDC20Q12834 499 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 ZNF77Q15935 545 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 KRTAP6-3Q3LI67 103 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 CCDC92Q53HC0 331 aaPredicted RBP1.59□□□□□ -2.15
SMC4-227ENST00000497984 ASCL5Q7RTU5 278 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 DHDDSQ86SQ9 333 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 ZSCAN30Q86W11 494 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 GMCL1P1Q8NEA9 526 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 STEAP2Q8NFT2 490 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 C15orf40Q8WUR7 153 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 SYAP1Q96A49 352 aaPredicted RBP1.59□□□□□ -2.15
SMC4-227ENST00000497984 C10orf35Q96D05 121 aa1.59□□□□□ -2.15
SMC4-227ENST00000497984 CNN2Q99439 309 aaKnown RBP1.59□□□□□ -2.15
SMC4-227ENST00000497984 ZNF717Q9BY31 904 aaPredicted RBP1.59□□□□□ -2.15
SMC4-227ENST00000497984 SAV1Q9H4B6 383 aaPredicted RBP1.59□□□□□ -2.15
SMC4-227ENST00000497984 RPF2Q9H7B2 306 aaKnown RBP1.59□□□□□ -2.15
SMC4-227ENST00000497984 POLE4Q9NR33 117 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms