RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 EXO5Q9H790 373 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 MCCC2Q9HCC0 563 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 KRCC1Q9NPI7 259 aaPredicted RBP5.84□□□□□ -1.47
TRA2B-216ENST00000493864 NANSQ9NR45 359 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 TBCCD1Q9NVR7 557 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 SMPD3Q9NY59 655 aaPredicted RBP5.84□□□□□ -1.47
TRA2B-216ENST00000493864 TAS2R5Q9NYW4 299 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 SPRR3Q9UBC9 169 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 SEC14L4Q9UDX3 406 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 IL20RAQ9UHF4 553 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 NPIPA1Q9UND3 350 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 SIGLEC7Q9Y286 467 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 TRAPPC4Q9Y296 219 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 HDGFL3Q9Y3E1 203 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 LRRC42Q9Y546 428 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 ORC6Q9Y5N6 252 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 SPIN1Q9Y657 262 aaPredicted RBP5.84□□□□□ -1.47
TRA2B-216ENST00000493864 AP4B1Q9Y6B7 739 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 COL12A1Q99715 3063 aa5.84□□□□□ -1.47
TRA2B-216ENST00000493864 UBR5O95071 2799 aaPredicted RBP5.84□□□□□ -1.48
TRA2B-216ENST00000493864 SHANK1Q9Y566 2161 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 A0A1B0GVC2 190 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 EIF4E1BA6NMX2 242 aaKnown RBP5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF814B7Z6K7 855 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 MS4A18H0YCH9 400 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 BLOC1S5-TXNDC5H3BN57 136 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 H3BN98 237 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 PLPP3O14495 311 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 TNFSF11O14788 317 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 SEC14L5O43304 696 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 CXCL13O43927 109 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 HCN1O60741 890 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 RAMP1O60894 148 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 AKR7A3O95154 331 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 RCBTB2O95199 551 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ACTL6AO96019 429 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 MT-ATP6P00846 226 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 IGHG3P01860 377 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 CRYABP02511 175 aaKnown RBP5.83□□□□□ -1.48
TRA2B-216ENST00000493864 TSPAN19P0C672 248 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ASAH2BP0C7U1 165 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 AQP2P41181 271 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 SLC9A3P48764 834 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 DIO1P49895 249 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF134P52741 427 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 CLDN18P56856 261 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 CARD18P57730 90 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 RPS16P62249 146 aaKnown RBP5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ESRRGP62508 458 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 HSF1Q00613 529 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 PMS2P3Q13401 168 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 PTGES3Q15185 160 aaKnown RBP5.83□□□□□ -1.48
TRA2B-216ENST00000493864 BCL2A1Q16548 175 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 C3AR1Q16581 482 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 CTU2Q2VPK5 515 aaKnown RBP5.83□□□□□ -1.48
TRA2B-216ENST00000493864 RFX4Q33E94 735 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 MS4A18Q3C1V0 323 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 HBMQ6B0K9 141 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF620Q6ZNG0 422 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 H1FNTQ75WM6 255 aaPredicted RBP5.83□□□□□ -1.48
TRA2B-216ENST00000493864 IGFN1Q86VF2 1251 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 Q8N1X5 172 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 PARP8Q8N3A8 854 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF843Q8N446 348 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 IQCF1Q8N6M8 205 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 TMEM99Q8N816 258 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 OR5J2Q8NH18 312 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 OR2V1Q8NHB1 315 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 DNAJC9Q8WXX5 260 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 MIB2Q96AX9 1013 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 NMD3Q96D46 503 aaKnown RBP5.83□□□□□ -1.48
TRA2B-216ENST00000493864 WDYHV1Q96HA8 205 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ADGRG7Q96K78 797 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF570Q96NI8 536 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 RDH12Q96NR8 316 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF184Q99676 751 aaPredicted RBP5.83□□□□□ -1.48
TRA2B-216ENST00000493864 TIMP4Q99727 224 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 TAPBPLQ9BX59 468 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 TSSK6Q9BXA6 273 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 GABARAPL3Q9BY60 117 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 SRXN1Q9BYN0 137 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 SLC25A18Q9H1K4 315 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 FKRPQ9H9S5 495 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 CHST11Q9NPF2 352 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 MRPL39Q9NYK5 338 aaKnown RBP5.83□□□□□ -1.48
TRA2B-216ENST00000493864 IL20Q9NYY1 176 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF229Q9UJW7 825 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 CDH10Q9Y6N8 788 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 ZGRF1Q86YA3 2104 aa5.83□□□□□ -1.48
TRA2B-216ENST00000493864 DOPEY2Q9Y3R5 2298 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 PTPN13Q12923 2485 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 IGHV3-15A0A0B4J1V0 119 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 A0A1B0GTH9 108 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 LOC100130705A0A1B0GUX0 176 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 GJE1A6NN92 205 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ZAR1LA6NP61 321 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 MCIDASD6RGH6 385 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 NPIPA2E9PIF3 369 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 C11orf98E9PRG8 122 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms