RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 MCHR2Q969V1 340 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 PRRC1Q96M27 445 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 HOPXQ9BPY8 73 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 POLR2J2Q9GZM3 115 aaKnown RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 POLR2J3Q9H1A7 115 aaKnown RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 MOV10Q9HCE1 1003 aaKnown RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 YAE1D1Q9NRH1 226 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 EGFL7Q9UHF1 273 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 FZR1Q9UM11 496 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 A0A096LNT2 108 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 SLC2A10O95528 541 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 RAB36O95755 333 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 IGHG1P01857 330 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 IFNW1P05000 195 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 THRBP10828 461 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 CCL2P13500 99 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 ACADSP16219 412 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 DRD4P21917 467 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 NR4A1P22736 598 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 NOS3P29474 1203 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 CDAP32320 146 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 DSCR9P59020 149 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 TOP3AQ13472 1001 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-214ENST00000493608 CBLL1Q75N03 491 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 CPLX4Q7Z7G2 160 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 IGFN1Q86VF2 1251 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF584Q8IVC4 421 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 CDK20Q8IZL9 346 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 LRRC18Q8N456 261 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 RNF148Q8N7C7 305 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 CLDN22Q8N7P3 220 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 IL17RDQ8NFM7 739 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 OR4K5Q8NGD3 323 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 OR51A7Q8NH64 312 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 C10orf105Q8TEF2 133 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 ASB10Q8WXI3 467 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 HDAC2Q92769 488 aaKnown RBP9.2□□□□□ -0.94
COL6A3-214ENST00000493608 FAM162AQ96A26 154 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 BPIFA2Q96DR5 249 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 DOK1Q99704 481 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 KCTD14Q9BQ13 255 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-214ENST00000493608 FNDC11Q9BVV2 318 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 MRPL13Q9BYD1 178 aaKnown RBP9.2□□□□□ -0.94
COL6A3-214ENST00000493608 MYLK2Q9H1R3 596 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 PLK3Q9H4B4 646 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 RNF121Q9H920 327 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 MAN2C1Q9NTJ4 1040 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 TMEM38BQ9NVV0 291 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 AP3M1Q9Y2T2 418 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 MALRD1Q5VYJ5 2156 aa9.2□□□□□ -0.94
COL6A3-214ENST00000493608 TRAV27A0A087WT01 109 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 IGKV1D-43A0A0B4J1Z2 117 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 KIAA1324LA8MWY0 1029 aaPredicted RBP9.19□□□□□ -0.94
COL6A3-214ENST00000493608 VSTM5A8MXK1 200 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 CD5LO43866 347 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 SNX3O60493 162 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 PDE5AO76074 875 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 UBL3O95164 117 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 ADRA2AP08913 450 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 TSPAN19P0C672 248 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 OR8G3PP0DMU2 310 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 SAGP10523 405 aaPredicted RBP9.19□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF35P13682 527 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 TCN1P20061 433 aaPredicted RBP9.19□□□□□ -0.94
COL6A3-214ENST00000493608 IFNA8P32881 189 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 PDLIM4P50479 330 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 CTXN1P60606 82 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 FMODQ06828 376 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 TRAM2Q15035 370 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 EFNB3Q15768 340 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 HIST3H3Q16695 136 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 IFI44LQ53G44 452 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 ALG10Q5BKT4 473 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 ARMC4Q5T2S8 1044 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 GKAP1Q5VSY0 366 aaPredicted RBP9.19□□□□□ -0.94
COL6A3-214ENST00000493608 TSEN54Q7Z6J9 526 aaKnown RBP9.19□□□□□ -0.94
COL6A3-214ENST00000493608 LRP11Q86VZ4 500 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 NRMQ8IXM6 262 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 FAM156AQ8NDB6 213 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 NOXO1Q8NFA2 376 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 LIPHQ8WWY8 451 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 GEMIN6Q8WXD5 167 aaKnown RBP9.19□□□□□ -0.94
COL6A3-214ENST00000493608 NSMAFQ92636 917 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 CMTM5Q96DZ9 223 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 FOXN4Q96NZ1 517 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 TNFRSF13CQ96RJ3 184 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 SYT3Q9BQG1 590 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 MRPL37Q9BZE1 423 aaKnown RBP9.19□□□□□ -0.94
COL6A3-214ENST00000493608 OR51B6Q9H340 312 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 TXNIPQ9H3M7 391 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 TPK1Q9H3S4 243 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF442Q9H7R0 627 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 ADA2Q9NZK5 511 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 ADAM21Q9UKJ8 722 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF346Q9UL40 294 aaKnown RBP9.19□□□□□ -0.94
COL6A3-214ENST00000493608 CMAHPQ9Y471 501 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 FKBP7Q9Y680 259 aa9.19□□□□□ -0.94
COL6A3-214ENST00000493608 A0A087WUU8 490 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 GMNCA6NCL1 334 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 LYNX1G3V0Z9 82 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms