RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	ARPIN	Q7Z6K5	226 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	DPPA2	Q7Z7J5	298 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF584	Q8IVC4	421 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	SLC30A7	Q8NEW0	376 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	CLDND2	Q8NHS1	167 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	FGFBP3	Q8TAT2	258 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF583	Q96ND8	569 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	C1orf198	Q9H425	327 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	NARFL	Q9H6Q4	476 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	RNF121	Q9H920	327 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	CDH20	Q9HBT6	801 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	TAS2R5	Q9NYW4	299 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	GPR160	Q9UJ42	338 aa		13.16	□□□□□ -0.3
MRPL55-231	ENST00000492170	FAM220BP	B1ANY3	271 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	DCTN3	O75935	186 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	LYPD3	O95274	346 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	BCL10	O95999	233 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	THY1	P04216	161 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	PGA4	P0DJD7	388 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	PGA3	P0DJD8	388 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	NAT2	P11245	290 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	COL8A2	P25067	703 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	CRYBA2	P53672	197 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	TMEM33	P57088	247 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	CLRN1	P58418	232 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	ERICH5	Q6P6B1	374 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	LRFN4	Q6PJG9	635 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	CCDC80	Q76M96	950 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	RBM45	Q8IUH3	476 aa	Known RBP	13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	OR4D11	Q8NGI4	311 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	RASSF5	Q8WWW0	418 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	TAMM41	Q96BW9	452 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	SH3GL3	Q99963	347 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	ECSIT	Q9BQ95	431 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF426	Q9BUY5	554 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF416	Q9BWM5	594 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	PCDHAC1	Q9H158	963 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	EFCAB1	Q9HAE3	211 aa		13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.15	□□□□□ -0.3
MRPL55-231	ENST00000492170	MCIDAS	D6RGH6	385 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	PPIH	O43447	177 aa	Known RBP	13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	PTH	P01270	115 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	QDPR	P09417	244 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	ASAH2B	P0C7U1	165 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	FAM157B	P0CG42	384 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	ITGA2	P17301	1181 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	ZNF84	P51523	738 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	KLF3	P57682	345 aa	Predicted RBP	13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	TBC1D28	Q2M2D7	210 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	ALKBH6	Q3KRA9	238 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	SLC36A2	Q495M3	483 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	NRN1L	Q496H8	165 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	SLC16A14	Q7RTX9	510 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	HDDC2	Q7Z4H3	204 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	CARM1	Q86X55	608 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	SLC15A3	Q8IY34	581 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	LRRC17	Q8N6Y2	441 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	OR4K5	Q8NGD3	323 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	OR1J2	Q8NGS2	313 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	SNX33	Q8WV41	574 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	YIPF5	Q969M3	257 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	TMEM186	Q96B77	213 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	LRRC37B	Q96QE4	947 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	HOPX	Q9BPY8	73 aa	Predicted RBP	13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	CMTM6	Q9NX76	183 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	TAAR3P	Q9P1P4	343 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	METRN	Q9UJH8	293 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	AP3M1	Q9Y2T2	418 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	GRIP1	Q9Y3R0	1128 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	NBEAL1	Q6ZS30	2694 aa		13.14	□□□□□ -0.31
MRPL55-231	ENST00000492170	IQCM	A0A1B0GVH7	501 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170		A0A1W2PRG6	482 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	BLOC1S5-TXNDC5	H3BN57	136 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	NCR1	O76036	304 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	LCK	P06239	509 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	MSMB	P08118	114 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	NUDT2	P50583	147 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	PLP2	Q04941	152 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	SCGB2A2	Q13296	93 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	TMEM154	Q6P9G4	183 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	SHQ1	Q6PI26	577 aa	Known RBP	13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	RBM15B	Q8NDT2	890 aa	Known RBP	13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	NOXO1	Q8NFA2	376 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	OR51F2	Q8NH61	342 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	SYNPR	Q8TBG9	265 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	C11orf40	Q8WZ69	217 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	MCHR2	Q969V1	340 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	RACGAP1	Q9H0H5	632 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	LRMDA	Q9H2I8	198 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	OR51B6	Q9H340	312 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	METTL17	Q9H7H0	456 aa	Predicted RBP	13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	LPAR2	Q9HBW0	351 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	HINT3	Q9NQE9	182 aa	Known RBP	13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	HIF1AN	Q9NWT6	349 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	SLCO1C1	Q9NYB5	712 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	ABCD2	Q9UBJ2	740 aa		13.13	□□□□□ -0.31
MRPL55-231	ENST00000492170	IGLV3-9	A0A075B6K5	115 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	C17orf100	A8MU93	164 aa		13.12	□□□□□ -0.31

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