RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ATAD3CQ5T2N8 411 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 PLCXD3Q63HM9 321 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ERASQ7Z444 233 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 FAM19A1Q7Z5A9 133 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MOB3BQ86TA1 216 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 TPRA1Q86W33 373 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ADGRF4Q8IZF3 695 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF441Q8N8Z8 693 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF565Q8N9K5 539 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 FNDC5Q8NAU1 212 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 OR10G8Q8NGN5 311 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MYDGFQ969H8 173 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 CMTM5Q96DZ9 223 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 C9orf72Q96LT7 481 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 C12orf57Q99622 126 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 IL12RB2Q99665 862 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 FAM173AQ9BQD7 235 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 SEC22CQ9BRL7 303 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 C9orf16Q9BUW7 83 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 DUSP26Q9BV47 211 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 OR51M1Q9H341 326 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 EFCAB1Q9HAE3 211 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 IFT46Q9NQC8 304 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 POLE4Q9NR33 117 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 PSMC3IPQ9P2W1 217 aaPredicted RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MLXQ9UH92 298 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 CYB5R1Q9UHQ9 305 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ABCG2Q9UNQ0 655 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 GINS2Q9Y248 185 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 PRELID3BQ9Y3B1 194 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MMP24Q9Y5R2 645 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF532Q9HCE3 1301 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 A0A1B0GWB2 263 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 A8MUA0 341 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 A8MVM7 634 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 CALUO43852 315 aaPredicted RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 PTTG1O95997 202 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 IGHV3-9P01782 118 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 UGT2B4P06133 528 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 SERPINA6P08185 405 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 IL7P13232 177 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 CDH5P33151 784 aaPredicted RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 TPMTP51580 245 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 OR2B6P58173 313 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 PUDPQ08623 228 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 GPR17Q13304 367 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 DMC1Q14565 340 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF658BQ4V348 819 aaPredicted RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 PHLDA2Q53GA4 152 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 PAGE2BQ5JRK9 111 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 OTUD1Q5VV17 481 aaPredicted RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 TYW3Q6IPR3 259 aaKnown RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 TMIGD1Q6UXZ0 262 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 LINC00299Q6ZSB3 139 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 KCTD8Q6ZWB6 473 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 OR7A2PQ8NGA2 310 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 CD300LFQ8TDQ1 290 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 GTF2H4Q92759 462 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 RPEQ96AT9 228 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 PPWD1Q96BP3 646 aaKnown RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 RPRD1AQ96P16 312 aaPredicted RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 DOK1Q99704 481 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 MCHR1Q99705 422 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 CMKLR1Q99788 373 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 FAM96AQ9H5X1 160 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 NANOGQ9H9S0 305 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 NRN1Q9NPD7 142 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 TREX1Q9NSU2 369 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 IL17CQ9P0M4 197 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 FZR1Q9UM11 496 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 RNF11Q9Y3C5 154 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 CBY1Q9Y3M2 126 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 IGLV5-39A0A0G2JS06 123 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 FAM92AA1XBS5 289 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 F8W036 122 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 NUPL2O15504 423 aaKnown RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 RRP8O43159 456 aaKnown RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 AHSA1O95433 338 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 F10P00742 488 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 NR3C1P04150 777 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 RAB3AP20336 220 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 CD40LGP29965 261 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 HOXA9P31269 272 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 DLSTP36957 453 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 AQP5P55064 265 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 FBXW4P57775 412 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 FLI1Q01543 452 aaPredicted RBP2.43□□□□□ -2.02
UBXN4-208ENST00000490163 UBE2SQ16763 222 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 SPATS1Q496A3 300 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 MTX3Q5HYI7 312 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 HES5Q5TA89 166 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 RUSC1-AS1Q66K80 236 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 PMF1Q6P1K2 205 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 PRSS57Q6UWY2 283 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 LACC1Q8IV20 430 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 EID3Q8N140 333 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 PRELID2Q8N945 189 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 TMEM35BQ8NCS4 154 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 OR5T2Q8NGG2 359 aa2.43□□□□□ -2.02
UBXN4-208ENST00000490163 PNPT1Q8TCS8 783 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms