RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 C6orf141Q5SZD1 244 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 TSPO2Q5TGU0 170 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 MEPCEQ7L2J0 689 aaKnown RBP11.8□□□□□ -0.52
TRAIP-210ENST00000489948 ABHD12BQ7Z5M8 362 aaPredicted RBP11.8□□□□□ -0.52
TRAIP-210ENST00000489948 GPR137CQ8N3F9 429 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 BBS1Q8NFJ9 593 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 OR9Q1Q8NGQ5 310 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 ZNF775Q96BV0 537 aaPredicted RBP11.8□□□□□ -0.52
TRAIP-210ENST00000489948 ALKBH3Q96Q83 286 aaPredicted RBP11.8□□□□□ -0.52
TRAIP-210ENST00000489948 YTHDF1Q9BYJ9 559 aaKnown RBP11.8□□□□□ -0.52
TRAIP-210ENST00000489948 ULBP2Q9BZM5 246 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 MED20Q9H944 212 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 MARCH7Q9H992 704 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 PLSCR4Q9NRQ2 329 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 MRPS18AQ9NVS2 196 aaKnown RBP11.8□□□□□ -0.52
TRAIP-210ENST00000489948 CNOT2Q9NZN8 540 aaKnown RBP11.8□□□□□ -0.52
TRAIP-210ENST00000489948 ZNF629Q9UEG4 869 aaPredicted RBP11.8□□□□□ -0.52
TRAIP-210ENST00000489948 WARS2Q9UGM6 360 aaKnown RBP11.8□□□□□ -0.52
TRAIP-210ENST00000489948 BLOC1S6Q9UL45 172 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 B9D1Q9UPM9 204 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 HIVEP3Q5T1R4 2406 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 ZNF462Q96JM2 2506 aa11.8□□□□□ -0.52
TRAIP-210ENST00000489948 IGKV1D-43A0A0B4J1Z2 117 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 SLC16A7O60669 478 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 KHDRBS3O75525 346 aaKnown RBP11.79□□□□□ -0.52
TRAIP-210ENST00000489948 UPK3AO75631 287 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 HRGP04196 525 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 QDPRP09417 244 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 GAAP10253 952 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 CLUP10909 449 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 DBTP11182 482 aaKnown RBP11.79□□□□□ -0.52
TRAIP-210ENST00000489948 EDNRAP25101 427 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 OPRM1P35372 400 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 SH3BGRP55822 239 aaPredicted RBP11.79□□□□□ -0.52
TRAIP-210ENST00000489948 POU4F2Q12837 409 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 FOXF2Q12947 444 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 MRPL49Q13405 166 aaKnown RBP11.79□□□□□ -0.52
TRAIP-210ENST00000489948 APOFQ13790 326 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 ESPL1Q14674 2120 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 SOWAHCQ53LP3 525 aaPredicted RBP11.79□□□□□ -0.52
TRAIP-210ENST00000489948 PHYHD1Q5SRE7 291 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 CARD17Q5XLA6 110 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 FBXW9Q5XUX1 488 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 VWA1Q6PCB0 445 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 LRFN4Q6PJG9 635 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 UGT2A3Q6UWM9 527 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 C3P1Q6ZMU1 363 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 Q6ZT83 130 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 ZNF627Q7L945 461 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 ATCAYQ86WG3 371 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 GLB1L2Q8IW92 636 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 ZNF100Q8IYN0 542 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 CNEP1R1Q8N9A8 125 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 PROKR2Q8NFJ6 384 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 STARD4Q96DR4 205 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 TSSK2Q96PF2 358 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 PIGMQ9H3S5 423 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 SLC7A10Q9NS82 523 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 H2AFY2Q9P0M6 372 aaPredicted RBP11.79□□□□□ -0.52
TRAIP-210ENST00000489948 OSGIN2Q9Y236 505 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 RPL36Q9Y3U8 105 aaKnown RBP11.79□□□□□ -0.52
TRAIP-210ENST00000489948 UGT2A1Q9Y4X1 527 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 PCDHGB5Q9Y5G0 923 aa11.79□□□□□ -0.52
TRAIP-210ENST00000489948 A0A0G2JNJ9 132 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 A0A1B0GUH1 482 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 IRGMA1A4Y4 181 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 TRIM64A6NGJ6 449 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 ZNF587BE7ETH6 402 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 DHHO43323 396 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 GYPBP06028 91 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 COX5AP20674 150 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 CRHBPP24387 322 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 GSTT1P30711 240 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 FMO3P31513 532 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 MTNR1AP48039 350 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 ZNF84P51523 738 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 GABARAPL2P60520 117 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 SIRPAP78324 504 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 PMPCAQ10713 525 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 KCNMB1Q16558 191 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 SMN1Q16637 294 aaKnown RBP11.78□□□□□ -0.52
TRAIP-210ENST00000489948 KCTD21Q4G0X4 260 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 MTFR2Q6P444 385 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 LINGO2Q7L985 606 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 BCDIN3DQ7Z5W3 292 aaKnown RBP11.78□□□□□ -0.52
TRAIP-210ENST00000489948 SLC26A10Q8NG04 563 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 RND1Q92730 232 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 BOD1Q96IK1 185 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 NR1H4Q96RI1 486 aaPredicted RBP11.78□□□□□ -0.52
TRAIP-210ENST00000489948 TEAD3Q99594 435 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 OR51V1Q9H2C8 321 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 C12orf49Q9H741 205 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 CRLF2Q9HC73 371 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 GPR35Q9HC97 309 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 FKBP14Q9NWM8 211 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 AASSQ9UDR5 926 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 Q9UFV3 132 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
TRAIP-210ENST00000489948 UBR5O95071 2799 aaPredicted RBP11.77□□□□□ -0.53
TRAIP-210ENST00000489948 EFCAB10A6NFE3 127 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms