RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 IGKV2D-24A0A075B6R9 120 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 A0A096LNJ9 63 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 LINC00854A0A1B0GVQ3 168 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 HAS3O00219 553 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 DYNC1I1O14576 645 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 MED6O75586 246 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 C2P06681 752 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 CRYGBP07316 175 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 ATP1B2P14415 290 aaPredicted RBP3.49□□□□□ -1.85
VPS26A-206ENST00000489794 TNNI1P19237 187 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 BTCP35070 178 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 GPR6P46095 362 aaPredicted RBP3.49□□□□□ -1.85
VPS26A-206ENST00000489794 DMTNQ08495 405 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 BST2Q10589 180 aaKnown RBP3.49□□□□□ -1.85
VPS26A-206ENST00000489794 DNAJC3Q13217 504 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 TMEM183BQ1AE95 376 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 PIP5KL1Q5T9C9 394 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 KHDRBS2Q5VWX1 349 aaKnown RBP3.49□□□□□ -1.85
VPS26A-206ENST00000489794 IGFL3Q6UXB1 125 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 LRRC31Q6UY01 552 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 EIF3MQ7L2H7 374 aaKnown RBP3.49□□□□□ -1.85
VPS26A-206ENST00000489794 TMEM135Q86UB9 458 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 TMEM183AQ8IXX5 376 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 KATNAL2Q8IYT4 538 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 GTPBP8Q8N3Z3 284 aaPredicted RBP3.49□□□□□ -1.85
VPS26A-206ENST00000489794 COMMD1Q8N668 190 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 CEP112Q8N8E3 955 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 OR2L3Q8NG85 312 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 FAM110BQ8TC76 370 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 CD300LFQ8TDQ1 290 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 FMO2Q99518 471 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 TRIM62Q9BVG3 475 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 TPK1Q9H3S4 243 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 GEMIN7Q9H840 131 aaKnown RBP3.49□□□□□ -1.85
VPS26A-206ENST00000489794 ZNF160Q9HCG1 818 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 LHX9Q9NQ69 397 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 PDP1Q9P0J1 537 aaPredicted RBP3.49□□□□□ -1.85
VPS26A-206ENST00000489794 CFAP45Q9UL16 551 aa3.49□□□□□ -1.85
VPS26A-206ENST00000489794 CSDC2Q9Y534 153 aaKnown RBP3.49□□□□□ -1.85
VPS26A-206ENST00000489794 MYO10Q9HD67 2058 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 C9JVG2 144 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 SS18L1O75177 396 aaPredicted RBP3.48□□□□□ -1.85
VPS26A-206ENST00000489794 OR7A10O76100 309 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 ERLIN2O94905 339 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 FTH1P02794 183 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 S100A9P06702 114 aaKnown RBP3.48□□□□□ -1.85
VPS26A-206ENST00000489794 IGHV3-43DP0DP04 118 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 MAGP20916 626 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 OMGP23515 440 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 RORAP35398 523 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 NPBWR2P48146 333 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 SLC11A1P49279 550 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 SUB1P53999 127 aaKnown RBP eCLIP3.48□□□□□ -1.858e-6■■■□□ 15.3
VPS26A-206ENST00000489794 CRISP3P54108 245 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 CDH6P55285 790 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 CARD18P57730 90 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 RGS8P57771 180 aaPredicted RBP3.48□□□□□ -1.85
VPS26A-206ENST00000489794 SPAG1Q07617 926 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 MERTKQ12866 999 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 AADACL4Q5VUY2 407 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 TRIM40Q6P9F5 258 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 C19orf35Q6ZS72 473 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 ZADH2Q8N4Q0 377 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 KIAA1143Q96AT1 154 aaPredicted RBP3.48□□□□□ -1.85
VPS26A-206ENST00000489794 AURKBQ96GD4 344 aaPredicted RBP3.48□□□□□ -1.85
VPS26A-206ENST00000489794 HSFY1Q96LI6 401 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 C12orf42Q96LP6 360 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 OR8B4Q96RC9 309 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 TAAR1Q96RJ0 339 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 SH3GL1Q99961 368 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 SH3GL3Q99963 347 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 LINC00597Q9H2U6 94 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 AUNIPQ9H7T9 357 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 PATZ1Q9HBE1 687 aaKnown RBP3.48□□□□□ -1.85
VPS26A-206ENST00000489794 ADAP2Q9NPF8 381 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 CYTL1Q9NRR1 136 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 PTTG3PQ9NZH4 202 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 TBX21Q9UL17 535 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 PSG11Q9UQ72 335 aa3.48□□□□□ -1.85
VPS26A-206ENST00000489794 CDHR2Q9BYE9 1310 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 SMCO3A2RU48 225 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 GOLGA8TH3BQL2 631 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 SOX15O60248 233 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 SPAG7O75391 227 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 SUPT3HO75486 399 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 IGHV2-5P01817 119 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 CXCL5P42830 114 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 CDKN1BP46527 198 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 PLP1P60201 277 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 HMGCS1Q01581 520 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 TGFBIQ15582 683 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 ZNF77Q15935 545 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 ZBED5Q49AG3 693 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 ZNF691Q5VV52 312 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 LCN12Q6JVE5 192 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 PCP2Q8IVA1 136 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 ZNF557Q8N988 423 aaPredicted RBP3.47□□□□□ -1.85
VPS26A-206ENST00000489794 ZNF596Q8TC21 504 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 TSEN15Q8WW01 171 aaKnown RBP3.47□□□□□ -1.85
VPS26A-206ENST00000489794 ISG20Q96AZ6 181 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms