RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 FBXW9Q5XUX1 488 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 C12orf73Q69YU5 71 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 H1FNTQ75WM6 255 aaPredicted RBP9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 FAM122BQ7Z309 247 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 NANOGNBQ7Z5D8 188 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 IGFN1Q86VF2 1251 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 P2RY8Q86VZ1 359 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 CCDC103Q8IW40 242 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 KDM8Q8N371 416 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 C10orf53Q8N6V4 93 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 ZNF775Q96BV0 537 aaPredicted RBP9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 HRASLS5Q96KN8 279 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 MUS81Q96NY9 551 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 TMEM204Q9BSN7 226 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 TAPBPLQ9BX59 468 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 RIBC2Q9H4K1 309 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 ESRP2Q9H6T0 727 aaKnown RBP9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 CCNB1IP1Q9NPC3 277 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 NRIP3Q9NQ35 241 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 PARPBPQ9NWS1 579 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 B3GALT5Q9Y2C3 310 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 GMPPBQ9Y5P6 360 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 CELSR1Q9NYQ6 3014 aa9.29□□□□□ -0.92
SCAMP4-208ENST00000489554 LOC102725191A0A1B0GVB3 256 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 TRIM64CA6NLI5 447 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 BLOC1S5-TXNDC5H3BN57 136 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 M0R129 80 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 TRAF3IP2O43734 574 aaPredicted RBP9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 TMCC2O75069 709 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 MRPL33O75394 65 aaKnown RBP9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 LYZL6O75951 148 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 NDUFB2O95178 105 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 CLIC3O95833 236 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 IGHMP01871 453 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 F13BP05160 661 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 TFAP2AP05549 437 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 SMIM18P0DKX4 95 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ADORA3P0DMS8 318 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ATP6V1B1P15313 513 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 FOSL1P15407 271 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 IGHV1-2P23083 117 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 EEF1B2P24534 225 aaKnown RBP9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 NTF4P34130 210 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 GGT2P36268 569 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 GIPRP48546 466 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 PRPS1P60891 318 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 NKX6-1P78426 367 aaPredicted RBP9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 PUDPQ08623 228 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 PMS2P3Q13401 168 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 GINS1Q14691 196 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 SLC17A1Q14916 467 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 PGGHGQ32M88 737 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ALG10Q5BKT4 473 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 CLEC12AQ5QGZ9 265 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 TIMM23BQ5SRD1 257 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ZNF691Q5VV52 312 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ALKBH2Q6NS38 261 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 UBE2J2Q8N2K1 259 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 LNX2Q8N448 690 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ZIC4Q8N9L1 334 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ZNF566Q969W8 418 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 MUCL1Q96DR8 90 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 TSPAN32Q96QS1 320 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 DDOQ99489 341 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 SF3B5Q9BWJ5 86 aaKnown RBP9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 TSSK6Q9BXA6 273 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ASPNQ9BXN1 380 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ASB6Q9NWX5 421 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 MALT1Q9UDY8 824 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ADAM18Q9Y3Q7 739 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 RNF115Q9Y4L5 304 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 SNX5Q9Y5X3 404 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 COMMD3-BMI1R4GMX3 469 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ALPK2Q86TB3 2170 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 ITPR3Q14573 2671 aa9.28□□□□□ -0.92
SCAMP4-208ENST00000489554 NPIPB13A6NJU9 1138 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 NPIPB4C9JG80 1138 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 C11orf98E9PRG8 122 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 H3BN98 237 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF701M0R085 212 aaPredicted RBP9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 HS3ST1O14792 307 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 ARPC3O15145 178 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 NOL3O60936 208 aaKnown RBP9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC2A10O95528 541 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 PPP1R3DO95685 299 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 TXNDC12O95881 172 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 CD3EP07766 207 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 CD14P08571 375 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 GABRB1P18505 474 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 EDNRAP25101 427 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 POU1F1P28069 291 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 IL5RAQ01344 420 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 PPA1Q15181 289 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 STK11Q15831 433 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 C6orf141Q5SZD1 244 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 NCMAPQ5T1S8 102 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 ARMC4Q5T2S8 1044 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 LAIR2Q6ISS4 152 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 RPL13AP3Q6NVV1 102 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 ADAM5Q6NVV9 412 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms