RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 GYPBP06028 91 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 IMPDH2P12268 514 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 EDNRAP25101 427 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 RFX2P48378 723 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 INPP1P49441 399 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 DAP3P51398 398 aaKnown RBP7.62□□□□□ -1.19
VTI1A-207ENST00000489357 MMP15P51511 669 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 EFNA3P52797 238 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 EMP2P54851 167 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 OR2B6P58173 313 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 MRPS10P82664 201 aaKnown RBP7.62□□□□□ -1.19
VTI1A-207ENST00000489357 MC2RQ01718 297 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 ROM1Q03395 351 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 SLC3A1Q07837 685 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 C19orf57Q0VDD7 668 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 COL9A2Q14055 689 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-207ENST00000489357 IL18Q14116 193 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 TOMM34Q15785 309 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-207ENST00000489357 MESTQ5EB52 335 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 IDNKQ5T6J7 187 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 C1orf189Q5VU69 101 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 C1orf140Q5VVS0 124 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 BICRALQ6AI39 1079 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 FCRLBQ6BAA4 426 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 KCTD18Q6PI47 426 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-207ENST00000489357 PLET1Q6UQ28 207 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 LRRN1Q6UXK5 716 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 B3GLCTQ6Y288 498 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 RAB11FIP2Q7L804 512 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 SSX6Q7RTT6 188 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 CPEB2Q7Z5Q1 589 aaKnown RBP7.62□□□□□ -1.19
VTI1A-207ENST00000489357 NRARPQ7Z6K4 114 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 MARCH3Q86UD3 253 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 ADGRG3Q86Y34 549 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 GATSQ8NAP1 163 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF519Q8TB69 540 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 ENKURQ8TC29 256 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 SLC25A43Q8WUT9 341 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-207ENST00000489357 HGDQ93099 445 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 DDIT4LQ96D03 193 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 RASD2Q96D21 266 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 NXPE2Q96DL1 559 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 MRGPRX4Q96LA9 322 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 TSPAN32Q96QS1 320 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 INTS14Q96SY0 518 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 CMKLR1Q99788 373 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 PTDSS2Q9BVG9 487 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 STRADBQ9C0K7 418 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 COMMD4Q9H0A8 199 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 CCDC86Q9H6F5 360 aaKnown RBP7.62□□□□□ -1.19
VTI1A-207ENST00000489357 TIGARQ9NQ88 270 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 RPRD1BQ9NQG5 326 aaKnown RBP7.62□□□□□ -1.19
VTI1A-207ENST00000489357 KLHL1Q9NR64 748 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 TAS2R5Q9NYW4 299 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 LAMP5Q9UJQ1 280 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 SPATA2Q9UM82 520 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 ETV7Q9Y603 341 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 KMT2BQ9UMN6 2715 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 HEATR5AQ86XA9 2040 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 EXPH5Q8NEV8 1989 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ZFHX4Q86UP3 3567 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 A0A1W2PNV4 684 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 PRSS37A4D1T9 235 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 CENPXA8MT69 81 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 C9orf172C9J069 976 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 FTCDNL1E5RQL4 147 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 LRRN3E7EW58 273 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 AIPO00170 330 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ADAM10O14672 748 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 GSTZ1O43708 216 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF254O75437 659 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ABHD16AO95870 558 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 IGHEP01854 428 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 RAB40ALP0C0E4 278 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 CALCBP10092 127 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 CCL4P13236 92 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF16P17020 682 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 PRKCAP17252 672 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ALOX5APP20292 161 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 HLA-DMAP28067 261 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 SHC1P29353 583 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ACVR1BP36896 505 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 DDOSTP39656 456 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 MNDAP41218 407 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 NAA10P41227 235 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 CASP3P42574 277 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 EIF2B2P49770 351 aaKnown RBP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 CAPZA1P52907 286 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 RPS11P62280 158 aaKnown RBP eCLIP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 GLO1Q04760 184 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 LTBQ06643 244 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 ALKBH1Q13686 389 aaKnown RBP7.61□□□□□ -1.19
VTI1A-207ENST00000489357 EXT1Q16394 746 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 COL28A1Q2UY09 1125 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 Q499Y3 187 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 TP53I3Q53FA7 332 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 TEX30Q5JUR7 227 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 UBE2NLQ5JXB2 153 aa7.61□□□□□ -1.19
VTI1A-207ENST00000489357 PWWP2BQ6NUJ5 590 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms