RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 UPB1Q9UBR1 384 aa16.1■□□□□ 0.17
C9orf16-203ENST00000489240 OSGIN2Q9Y236 505 aa16.1■□□□□ 0.17
C9orf16-203ENST00000489240 FREM1Q5H8C1 2179 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 EFCAB10A6NFE3 127 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 HSPB2A8KAH6 182 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 DHHO43323 396 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 XPNPEP2O43895 674 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 UPK3AO75631 287 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 SMNDC1O75940 238 aaKnown RBP eCLIP16.09■□□□□ 0.17
C9orf16-203ENST00000489240 TNFAIP8O95379 198 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 CRHBPP24387 322 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 CTSSP25774 331 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 PMPCAQ10713 525 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 STK11Q15831 433 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 HSPB2Q16082 182 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 PHYHD1Q5SRE7 291 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 TSPO2Q5TGU0 170 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 GLB1L2Q8IW92 636 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 GALNT11Q8NCW6 608 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 ZNF540Q8NDQ6 660 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 OR51L1Q8NGJ5 315 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 NSMAFQ92636 917 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 BBC3Q96PG8 261 aaPredicted RBP16.09■□□□□ 0.17
C9orf16-203ENST00000489240 SFXN3Q9BWM7 321 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 AMBNQ9NP70 447 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 SLC7A10Q9NS82 523 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 CNOT2Q9NZN8 540 aaKnown RBP16.09■□□□□ 0.17
C9orf16-203ENST00000489240 PSORS1C1Q9UIG5 152 aa16.09■□□□□ 0.17
C9orf16-203ENST00000489240 COA3Q9Y2R0 106 aaPredicted RBP16.09■□□□□ 0.17
C9orf16-203ENST00000489240 INTS1Q8N201 2190 aaKnown RBP16.09■□□□□ 0.17
C9orf16-203ENST00000489240 SPTA1P02549 2419 aa16.08■□□□□ 0.17
C9orf16-203ENST00000489240 IGSF10Q6WRI0 2623 aa16.08■□□□□ 0.17
C9orf16-203ENST00000489240 FAM171A2A8MVW0 826 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 B8ZZF3 427 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 RPL36A-HNRNPH2H7BZ11 118 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 HLA-DQA2P01906 255 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 STSP08842 583 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 PIPP12273 146 aaPredicted RBP16.08■□□□□ 0.16
C9orf16-203ENST00000489240 LAP3P28838 519 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 GSTT1P30711 240 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 ATP6V1E1P36543 226 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 GUCA1AP43080 201 aaPredicted RBP16.08■□□□□ 0.16
C9orf16-203ENST00000489240 GABARAPL2P60520 117 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 FOXF2Q12947 444 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 GGTLC2Q14390 218 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 ETFDHQ16134 617 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 LINC01590Q5TEZ4 76 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 FBXW9Q5XUX1 488 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.08■□□□□ 0.16
C9orf16-203ENST00000489240 UBE2J2Q8N2K1 259 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 IPCEF1Q8WWN9 437 aaPredicted RBP16.08■□□□□ 0.16
C9orf16-203ENST00000489240 KISS1RQ969F8 398 aaPredicted RBP16.08■□□□□ 0.16
C9orf16-203ENST00000489240 MYDGFQ969H8 173 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 ZMYND19Q96E35 227 aaPredicted RBP16.08■□□□□ 0.16
C9orf16-203ENST00000489240 RNFT2Q96EX2 444 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 DMRTA2Q96SC8 542 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 RBM24Q9BX46 236 aaKnown RBP16.08■□□□□ 0.16
C9orf16-203ENST00000489240 CRLF2Q9HC73 371 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 GPR35Q9HC97 309 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 CCNB1IP1Q9NPC3 277 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 PLSCR4Q9NRQ2 329 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 MRPS18AQ9NVS2 196 aaKnown RBP16.08■□□□□ 0.16
C9orf16-203ENST00000489240 PROCRQ9UNN8 238 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 MEMO1Q9Y316 297 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 COL6A6A6NMZ7 2263 aa16.08■□□□□ 0.16
C9orf16-203ENST00000489240 IGKV1D-43A0A0B4J1Z2 117 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 A0A1W2PPL8 197 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 ZNF587BE7ETH6 402 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 PTGES3LE9PB15 166 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 TNFSF13O75888 250 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 CNOT4O95628 575 aaKnown RBP16.07■□□□□ 0.16
C9orf16-203ENST00000489240 EEF1B2P24534 225 aaKnown RBP16.07■□□□□ 0.16
C9orf16-203ENST00000489240 OPRM1P35372 400 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 SLC15A1P46059 708 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 ROR2Q01974 943 aaKnown RBP16.07■□□□□ 0.16
C9orf16-203ENST00000489240 DBPQ10586 325 aaPredicted RBP16.07■□□□□ 0.16
C9orf16-203ENST00000489240 RAB40BQ12829 278 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 KCTD21Q4G0X4 260 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 VWA1Q6PCB0 445 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 TFAP2EQ6VUC0 442 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 ZNRF4Q8WWF5 429 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 GGHQ92820 318 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 ALKBH3Q96Q83 286 aaPredicted RBP16.07■□□□□ 0.16
C9orf16-203ENST00000489240 MARCH7Q9H992 704 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 MALT1Q9UDY8 824 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 PRSS50Q9UI38 385 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 PCDHGB1Q9Y5G3 927 aa16.07■□□□□ 0.16
C9orf16-203ENST00000489240 FADS2O95864 444 aaKnown RBP16.06■□□□□ 0.16
C9orf16-203ENST00000489240 IL18BPO95998 194 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 IGHV3-9P01782 118 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 CD8BP10966 210 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 EDNRAP25101 427 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 HSF2Q03933 536 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 TLE1Q04724 770 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 FAPQ12884 760 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 MRPL49Q13405 166 aaKnown RBP16.06■□□□□ 0.16
C9orf16-203ENST00000489240 CEACAM16Q2WEN9 425 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 B3GLCTQ6Y288 498 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 AHSA2Q719I0 299 aa16.06■□□□□ 0.16
C9orf16-203ENST00000489240 BTLAQ7Z6A9 289 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms