RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 C10orf128Q5T292 105 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 DPPA2Q7Z7J5 298 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 LRP11Q86VZ4 500 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 OFCC1Q8IZS5 231 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 ZNF540Q8NDQ6 660 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 SLC30A7Q8NEW0 376 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 BPIFA2Q96DR5 249 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 TMEM160Q9NX00 188 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 MYEF2Q9P2K5 600 aaKnown RBP19.79■□□□□ 0.76
COL9A3-213ENST00000489045 STX18Q9P2W9 335 aaKnown RBP19.79■□□□□ 0.76
COL9A3-213ENST00000489045 RHCGQ9UBD6 479 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 FZR1Q9UM11 496 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 HIF3AQ9Y2N7 669 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 SNX13Q9Y5W8 968 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 NPIPB13A6NJU9 1138 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 NPIPB4C9JG80 1138 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 J3KTA2 159 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 M0R233 179 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 SLC2A10O95528 541 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 ZNF682O95780 498 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 CCL2P13500 99 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 ZNF23P17027 643 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 GIFP27352 417 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 ALDH3B1P43353 468 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 ZNF133P52736 654 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-213ENST00000489045 TOP3AQ13472 1001 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-213ENST00000489045 ALG10Q5BKT4 473 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 C8orf82Q6P1X6 216 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-213ENST00000489045 TREML1Q86YW5 311 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 LRRC18Q8N456 261 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 PAQR4Q8N4S7 273 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-213ENST00000489045 UBASH3BQ8TF42 649 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 HDAC2Q92769 488 aaKnown RBP19.78■□□□□ 0.76
COL9A3-213ENST00000489045 MSI2Q96DH6 328 aaKnown RBP19.78■□□□□ 0.76
COL9A3-213ENST00000489045 HOPXQ9BPY8 73 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-213ENST00000489045 TXNIPQ9H3M7 391 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 MAN2C1Q9NTJ4 1040 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 REV1Q9UBZ9 1251 aa19.78■□□□□ 0.76
COL9A3-213ENST00000489045 GSTA4O15217 222 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 LMX1BO60663 402 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 MAKP20794 623 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 GSK3BP49841 420 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 FMODQ06828 376 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 MAD2L1BPQ15013 274 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-213ENST00000489045 PODNL1Q6PEZ8 512 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 MEX3DQ86XN8 651 aaKnown RBP19.77■□□□□ 0.76
COL9A3-213ENST00000489045 NRMQ8IXM6 262 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 ZNF786Q8N393 782 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 RBM15BQ8NDT2 890 aaKnown RBP19.77■□□□□ 0.76
COL9A3-213ENST00000489045 GEMIN6Q8WXD5 167 aaKnown RBP19.77■□□□□ 0.76
COL9A3-213ENST00000489045 NMD3Q96D46 503 aaKnown RBP19.77■□□□□ 0.76
COL9A3-213ENST00000489045 FNDC11Q9BVV2 318 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 C1orf198Q9H425 327 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 EFCAB1Q9HAE3 211 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 CDH20Q9HBT6 801 aa19.77■□□□□ 0.76
COL9A3-213ENST00000489045 IGKV1D-43A0A0B4J1Z2 117 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 LOC100289279A0A1B0GTE1 492 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 HTR3EA5X5Y0 456 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 LYNX1G3V0Z9 82 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 FFAR1O14842 300 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 IFNA2P01563 188 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 MMP7P09237 267 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-213ENST00000489045 FAM157BP0CG42 384 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 FAM157CP0CG43 387 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 LYNX1P0DP58 116 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 SAGP10523 405 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-213ENST00000489045 CDAP32320 146 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 NUDT2P50583 147 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 SEC24CP53992 1094 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 CD47Q08722 323 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 TRAM2Q15035 370 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 TBC1D28Q2M2D7 210 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 IFI44LQ53G44 452 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 FAM166AQ6J272 317 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 CBLL1Q75N03 491 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 CXXC5Q7LFL8 322 aaKnown RBP19.76■□□□□ 0.75
COL9A3-213ENST00000489045 IGFN1Q86VF2 1251 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 HSH2DQ96JZ2 352 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 BEX2Q9BXY8 128 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 OR51B6Q9H340 312 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 MS4A5Q9H3V2 200 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 SMURF2Q9HAU4 748 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 DUSP13Q9UII6 198 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 KCNS2Q9ULS6 477 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 UGT2A1Q9Y4X1 527 aa19.76■□□□□ 0.75
COL9A3-213ENST00000489045 LRP5LA4QPB2 252 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 SERPINA1P01009 418 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 PTHP01270 115 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 TCN1P20061 433 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-213ENST00000489045 IGFBP5P24593 272 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 MRPS34P82930 218 aaKnown RBP19.75■□□□□ 0.75
COL9A3-213ENST00000489045 TAF11Q15544 211 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 RGS7BPQ6MZT1 257 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-213ENST00000489045 HACD2Q6Y1H2 254 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 ARIH2OSQ8N7S6 290 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 NSMAFQ92636 917 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 NABP1Q96AH0 204 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 SOX7Q9BT81 388 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 CHODLQ9H9P2 273 aa19.75■□□□□ 0.75
COL9A3-213ENST00000489045 SIAEQ9HAT2 523 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms