RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 MAGEB4O15481 346 aaPredicted RBP1.98□□□□□ -2.09
CD46-215ENST00000488596 SPAG7O75391 227 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 C6orf47O95873 294 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 NDUFB10O96000 172 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 ZDHHC11BP0C7U3 371 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 SMIM10L1P0DMW3 83 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 PRPS2P11908 318 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 ZNF250P15622 560 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 ZNF823P16415 610 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 HRH1P35367 487 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 LONP1P36776 959 aaKnown RBP1.98□□□□□ -2.09
CD46-215ENST00000488596 UBE2AP49459 152 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 ATP5IP56385 69 aaPredicted RBP1.98□□□□□ -2.09
CD46-215ENST00000488596 YWHAGP61981 247 aaKnown RBP eCLIP1.98□□□□□ -2.09
CD46-215ENST00000488596 EBI3Q14213 229 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 VPS26BQ4G0F5 336 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 CCDC183Q5T5S1 534 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 SPECC1LQ69YQ0 1117 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 ANKRD26P1Q6NSI1 321 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 SASS6Q6UVJ0 657 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 TMEM107Q6UX40 140 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 ZNF493Q6ZR52 646 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 CDH26Q8IXH8 852 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 C12orf56Q8IXR9 622 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 RHEBL1Q8TAI7 183 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 CXorf40AQ8TE69 158 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 STARD8Q92502 1023 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 KIFAP3Q92845 792 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 SMIM10Q96HG1 83 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 TPD52L3Q96J77 140 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 BMFQ96LC9 184 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 WFIKKN1Q96NZ8 548 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 P2RX4Q99571 388 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 SH3GL3Q99963 347 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 CENPKQ9BS16 269 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 GPR61Q9BZJ8 451 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 TM9SF3Q9HD45 589 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 SLC40A1Q9NP59 571 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 FGF20Q9NP95 211 aaPredicted RBP1.98□□□□□ -2.09
CD46-215ENST00000488596 KCNJ16Q9NPI9 418 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 PSMC3IPQ9P2W1 217 aaPredicted RBP1.98□□□□□ -2.09
CD46-215ENST00000488596 CD84Q9UIB8 345 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 LSM7Q9UK45 103 aaKnown RBP1.98□□□□□ -2.09
CD46-215ENST00000488596 RABL2BQ9UNT1 228 aa1.98□□□□□ -2.09
CD46-215ENST00000488596 RRP15Q9Y3B9 282 aaKnown RBP1.98□□□□□ -2.09
CD46-215ENST00000488596 MN1Q10571 1320 aaPredicted RBP1.97□□□□□ -2.09
CD46-215ENST00000488596 CAMTA1Q9Y6Y1 1673 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 IGKV2D-24A0A075B6R9 120 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 ZNF816-ZNF321PA0A0X1KG74 233 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 GOLGA8OA6NCC3 632 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 SMCO2A6NFE2 343 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 ZNF716A6NP11 495 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 GOLGA8NF8WBI6 632 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 H0YHG0 523 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 DLGAP1O14490 977 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 DYNC1I1O14576 645 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 ENTPD5O75356 428 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 AIFM1O95831 613 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 TSPAN13O95857 204 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 FABP3P05413 133 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 ANXA5P08758 320 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 ZNF735P0CB33 412 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 CALM1P0DP23 149 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 CALM2P0DP24 149 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 CALM3P0DP25 149 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 ZNF43P17038 809 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 CDKN2BP42772 138 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 CCNHP51946 323 aaPredicted RBP1.97□□□□□ -2.09
CD46-215ENST00000488596 LINC00315P59091 139 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 SLAQ13239 276 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 PRPSAP1Q14558 356 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 MRPL23Q16540 153 aaKnown RBP1.97□□□□□ -2.09
CD46-215ENST00000488596 POU2AF1Q16633 256 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 HES5Q5TA89 166 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 ZYG11AQ6WRX3 759 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 Q6ZSR3 168 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 TMEM179Q6ZVK1 233 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 H2AFVQ71UI9 128 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 TMEM135Q86UB9 458 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 MMAAQ8IVH4 418 aaKnown RBP1.97□□□□□ -2.09
CD46-215ENST00000488596 SAXO1Q8IYX7 474 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 LIX1Q8N485 282 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 FAM86B1Q8N7N1 296 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 CYB561D1Q8N8Q1 229 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 SPATA4Q8NEY3 305 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 OR5B3Q8NH48 314 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 RNF139Q8WU17 664 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 FAM3DQ96BQ1 224 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 CCDC126Q96EE4 140 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 PKNOX2Q96KN3 472 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 SLC29A1Q99808 456 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 MRPL37Q9BZE1 423 aaKnown RBP1.97□□□□□ -2.09
CD46-215ENST00000488596 ANKRA2Q9H9E1 313 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 LHX9Q9NQ69 397 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 PSG8Q9UQ74 426 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 IKBKGQ9Y6K9 419 aa1.97□□□□□ -2.09
CD46-215ENST00000488596 ASTN1O14525 1302 aa1.96□□□□□ -2.1
CD46-215ENST00000488596 RAB29O14966 203 aa1.96□□□□□ -2.1
CD46-215ENST00000488596 RNF13O43567 381 aa1.96□□□□□ -2.1
CD46-215ENST00000488596 DPM1O60762 260 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms