RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PIGFQ07326 219 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 TAF11Q15544 211 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 ADIPOQQ15848 244 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 MSMPQ1L6U9 139 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 NRN1LQ496H8 165 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 SLC25A47Q6Q0C1 308 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 FBXL14Q8N1E6 418 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 NUP37Q8NFH4 326 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 GTPBP3Q969Y2 492 aaKnown RBP12.3□□□□□ -0.44
COL9A2-208ENST00000488463 NABP1Q96AH0 204 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 FAM46AQ96IP4 442 aaKnown RBP12.3□□□□□ -0.44
COL9A2-208ENST00000488463 C18orf12Q96KH6 178 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 SMR3AQ99954 134 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 CACNG6Q9BXT2 260 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
COL9A2-208ENST00000488463 SMURF2Q9HAU4 748 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 IL1RAPQ9NPH3 570 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 TAS2R1Q9NYW7 299 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 SIGLEC7Q9Y286 467 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 SH3PXD2BA1X283 911 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 H7C1Q1 480 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 H7C417 338 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 RRP9O43818 475 aaKnown RBP12.29□□□□□ -0.44
COL9A2-208ENST00000488463 SLC2A10O95528 541 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 MMP7P09237 267 aaPredicted RBP12.29□□□□□ -0.44
COL9A2-208ENST00000488463 OR8G3PP0DMU2 310 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 CD79AP11912 226 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 HOXB4P17483 251 aaPredicted RBP12.29□□□□□ -0.44
COL9A2-208ENST00000488463 MAGEA2P43356 314 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 CAPZA2P47755 286 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 GIPRP48546 466 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 RAB1AP62820 205 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 NPRL3Q12980 569 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 ZBED5Q49AG3 693 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 THSD4Q6ZMP0 1018 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 FAM122BQ7Z309 247 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 HDDC2Q7Z4H3 204 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 ARHGAP24Q8N264 748 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 OR4F15Q8NGB8 312 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 OR4K5Q8NGD3 323 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 TRMT61AQ96FX7 289 aaKnown RBP12.29□□□□□ -0.44
COL9A2-208ENST00000488463 SH3GL3Q99963 347 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 ALG12Q9BV10 488 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 STX18Q9P2W9 335 aaKnown RBP12.29□□□□□ -0.44
COL9A2-208ENST00000488463 TMEM5Q9Y2B1 443 aa12.29□□□□□ -0.44
COL9A2-208ENST00000488463 FAM32AQ9Y421 112 aaKnown RBP12.29□□□□□ -0.44
COL9A2-208ENST00000488463 TMEM129A0AVI4 362 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 GMNNO75496 209 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 PDE5AO76074 875 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 UBL3O95164 117 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 CD14P08571 375 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 IGFBP1P08833 259 aaPredicted RBP12.28□□□□□ -0.44
COL9A2-208ENST00000488463 INHBBP09529 407 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 THBS4P35443 961 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 ACVR1BP36896 505 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 MRPS34P82930 218 aaKnown RBP12.28□□□□□ -0.44
COL9A2-208ENST00000488463 TNK1Q13470 666 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 TOP3AQ13472 1001 aaPredicted RBP12.28□□□□□ -0.44
COL9A2-208ENST00000488463 EFNB3Q15768 340 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 ETFDHQ16134 617 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 FGD3Q5JSP0 725 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 LCN8Q6JVE9 175 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 CYP2R1Q6VVX0 501 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 FOXL2NBQ6ZUU3 175 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 ZER1Q7Z7L7 766 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 ARIH2OSQ8N7S6 290 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 IL17RDQ8NFM7 739 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 OR52J3Q8NH60 311 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 GPX7Q96SL4 187 aaPredicted RBP12.28□□□□□ -0.44
COL9A2-208ENST00000488463 C1orf21Q9H246 121 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 ZNF442Q9H7R0 627 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 ADAM18Q9Y3Q7 739 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 DNHD1Q96M86 4753 aa12.28□□□□□ -0.44
COL9A2-208ENST00000488463 YLPM1P49750 1951 aaKnown RBP12.27□□□□□ -0.44
COL9A2-208ENST00000488463 MXRA5Q9NR99 2828 aa12.27□□□□□ -0.44
COL9A2-208ENST00000488463 ABCA2Q9BZC7 2435 aa12.27□□□□□ -0.44
COL9A2-208ENST00000488463 SERPINA5P05154 406 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 OR4A8P0C604 315 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 ITGA2P17301 1181 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 NR4A1P22736 598 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 CDAP32320 146 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 SERPINF1P36955 418 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 PTDSS1P48651 473 aaKnown RBP12.27□□□□□ -0.45
COL9A2-208ENST00000488463 HMGA2P52926 109 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 ERVK-25P63136 954 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 TRIM25Q14258 630 aaKnown RBP12.27□□□□□ -0.45
COL9A2-208ENST00000488463 RAB39AQ14964 217 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 CLEC12BQ2HXU8 276 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 MESTQ5EB52 335 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 THEM4Q5T1C6 240 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 FAM205BPQ63HN1 556 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 BIVMQ86UB2 503 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 CDK20Q8IZL9 346 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 NANOS1Q8WY41 292 aaKnown RBP12.27□□□□□ -0.45
COL9A2-208ENST00000488463 FBXO17Q96EF6 278 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 CLPTM1LQ96KA5 538 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 Q96M85 177 aa12.27□□□□□ -0.45
COL9A2-208ENST00000488463 PLK3Q9H4B4 646 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms