RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 KCTD21Q4G0X4 260 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 GALNT17Q6IS24 598 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 DNAJC24Q6P3W2 148 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 ABHD13Q7L211 337 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 LHFPL3Q86UP9 236 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 CEP112Q8N8E3 955 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 STEAP2Q8NFT2 490 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 OR2G2Q8NGZ5 317 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 OR4S2Q8NH73 311 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 RNF139Q8WU17 664 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 HSFY1Q96LI6 401 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 SH3GL3Q99963 347 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 TRIM62Q9BVG3 475 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 ISYNA1Q9NPH2 558 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 A8MUU9 505 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 CCL21O00585 134 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 SNNO75324 88 aaPredicted RBP2.49□□□□□ -2.01
LTN1-206ENST00000486427 RP2O75695 350 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 RHOBTB1O94844 696 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 C1orf105O95561 183 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 IGKV4-1P06312 121 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 HRH1P35367 487 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 MAGEA8P43361 318 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 CDKN1BP46527 198 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 YAP1P46937 504 aaKnown RBP2.49□□□□□ -2.01
LTN1-206ENST00000486427 OGDHQ02218 1023 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 FGL1Q08830 312 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 CCDC152Q4G0S7 254 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 CFAP157Q5JU67 520 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 ATAD3BQ5T9A4 648 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 TMEM179Q6ZVK1 233 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 TM4SF18Q96CE8 201 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 RPRD1AQ96P16 312 aaPredicted RBP2.49□□□□□ -2.01
LTN1-206ENST00000486427 PSKH2Q96QS6 385 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 CCT7Q99832 543 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 RNF5Q99942 180 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 RPF2Q9H7B2 306 aaKnown RBP2.49□□□□□ -2.01
LTN1-206ENST00000486427 NMRAL1Q9HBL8 299 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 GPATCH2LQ9NWQ4 482 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 CDH9Q9ULB4 789 aa2.49□□□□□ -2.01
LTN1-206ENST00000486427 CD1CP29017 333 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 SERPINB5P36952 375 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 IFNAR2P48551 515 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 CDC20Q12834 499 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 PRPSAP1Q14558 356 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 NECAP1Q8NC96 275 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 OR52M1Q8NGK5 317 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 TRIM44Q96DX7 344 aaPredicted RBP2.48□□□□□ -2.01
LTN1-206ENST00000486427 L3HYPDHQ96EM0 354 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 CNN2Q99439 309 aaKnown RBP2.48□□□□□ -2.01
LTN1-206ENST00000486427 KCTD14Q9BQ13 255 aaPredicted RBP2.48□□□□□ -2.01
LTN1-206ENST00000486427 TMEM59Q9BXS4 323 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 MFFQ9GZY8 342 aa2.48□□□□□ -2.01
LTN1-206ENST00000486427 NUP214P35658 2090 aaPredicted RBP2.47□□□□□ -2.01
LTN1-206ENST00000486427 TRAV39A0A0B4J263 110 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 A0A0B4J2A0 478 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 H0YCG3 227 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 GMFGO60234 142 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 HSD17B2P37059 387 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 VHLP40337 213 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 UGT2B15P54855 530 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 CDH4P55283 916 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 ZNF816Q0VGE8 651 aaPredicted RBP2.47□□□□□ -2.01
LTN1-206ENST00000486427 MRPL28Q13084 256 aaKnown RBP2.47□□□□□ -2.01
LTN1-206ENST00000486427 EXOC3L2Q2M3D2 409 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 FAM78AQ5JUQ0 283 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 KDM7AQ6ZMT4 941 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 BHLHA15Q7RTS1 189 aaPredicted RBP2.47□□□□□ -2.01
LTN1-206ENST00000486427 PEX26Q7Z412 305 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 PPP1R42Q7Z4L9 355 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 LINC00304Q8N9R0 145 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 FAM83FQ8NEG4 500 aaPredicted RBP2.47□□□□□ -2.01
LTN1-206ENST00000486427 NOXO1Q8NFA2 376 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 ABHD3Q8WU67 409 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 ZNF681Q96N22 645 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 FMO2Q99518 471 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 TCHPQ9BT92 498 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 SYNDIG1Q9H7V2 258 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 UBE2ZQ9H832 354 aaPredicted RBP2.47□□□□□ -2.01
LTN1-206ENST00000486427 GORASP2Q9H8Y8 452 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 SHPKQ9UHJ6 478 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 N6AMT1Q9Y5N5 214 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 PTPRTO14522 1441 aa2.47□□□□□ -2.01
LTN1-206ENST00000486427 IGLV1-50A0A075B6I6 118 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 SPECC1L-ADORA2AF8WAN1 911 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 EIF3GO75821 320 aaKnown RBP eCLIP2.46□□□□□ -2.02
LTN1-206ENST00000486427 HLA-DPB1P04440 258 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 DBTP11182 482 aaKnown RBP2.46□□□□□ -2.02
LTN1-206ENST00000486427 CX3CR1P49238 355 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 ARFIP1P53367 373 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 MAB21L1Q13394 359 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 GPM6BQ13491 265 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 ARHGAP19Q14CB8 494 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 ZNF77Q15935 545 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 ANKDD1AQ495B1 522 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 RAET1LQ5VY80 246 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 SPECC1LQ69YQ0 1117 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 PRMT9Q6P2P2 845 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 HDDC2Q7Z4H3 204 aa2.46□□□□□ -2.02
LTN1-206ENST00000486427 CALHM3Q86XJ0 350 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms