RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 ENTPD5O75356 428 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 IGHG1P01857 330 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 TSPAN19P0C672 248 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 RAP2AP10114 183 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 NR2C1P13056 603 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 ACADSP16219 412 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 RRM2P31350 389 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 FOXG1P55316 489 aaPredicted RBP7.8□□□□□ -1.16
COL8A1-207ENST00000483969 KRTAP10-9P60411 292 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 CTXN1P60606 82 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 UBE2NP61088 152 aaKnown RBP7.8□□□□□ -1.16
COL8A1-207ENST00000483969 ARF1P84077 181 aaKnown RBP7.8□□□□□ -1.16
COL8A1-207ENST00000483969 GTF3C1Q12789 2109 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 FLOT2Q14254 428 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 ACKR1Q16570 336 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 CCDC121Q6ZUS5 278 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 SPATA24Q86W54 205 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 OR4K5Q8NGD3 323 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 OR1K1Q8NGR3 316 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 OR52N5Q8NH56 324 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 MOSPD2Q8NHP6 518 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 MAGEE2Q8TD90 523 aaPredicted RBP7.8□□□□□ -1.16
COL8A1-207ENST00000483969 GNPDA2Q8TDQ7 276 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 BCL2L2Q92843 193 aaPredicted RBP7.8□□□□□ -1.16
COL8A1-207ENST00000483969 RBP7Q96R05 134 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 CADM1Q9BY67 442 aaKnown RBP7.8□□□□□ -1.16
COL8A1-207ENST00000483969 KRTAP17-1Q9BYP8 105 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 ULBP2Q9BZM5 246 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 TXNIPQ9H3M7 391 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 CRLF2Q9HC73 371 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 SLC17A5Q9NRA2 495 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 GLTPQ9NZD2 209 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 PCDHB10Q9UN67 800 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 SLC25A15Q9Y619 301 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.79□□□□□ -1.16
COL8A1-207ENST00000483969 UNC119BA6NIH7 251 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 A6NIZ1 184 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 CYSRT1A8MQ03 144 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 GNGT2O14610 69 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 MGRN1O60291 552 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 PTP4A3O75365 173 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 PTAFRP25105 342 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 RPL4P36578 427 aaKnown RBP7.79□□□□□ -1.16
COL8A1-207ENST00000483969 MAGEA2P43356 314 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 GPR4P46093 362 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 OMPP47874 163 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 CLRN1P58418 232 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 RAP1BP61224 184 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 RPS4XP62701 263 aaKnown RBP7.79□□□□□ -1.16
COL8A1-207ENST00000483969 RAP1AP62834 184 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 LGALS3BPQ08380 585 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 GK3PQ14409 553 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 CEACAM16Q2WEN9 425 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 NCMAPQ5T1S8 102 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 FAM205BPQ63HN1 556 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 OR2T5Q6IEZ7 315 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 TMEM108Q6UXF1 575 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 ZER1Q7Z7L7 766 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 WDR31Q8NA23 367 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 OR2T29Q8NH02 315 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 FNDC8Q8TC99 324 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 ASB10Q8WXI3 467 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 TMEM54Q969K7 222 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 RADILQ96JH8 1075 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 ALKBH3Q96Q83 286 aaPredicted RBP7.79□□□□□ -1.16
COL8A1-207ENST00000483969 FUZQ9BT04 418 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 CHID1Q9BWS9 393 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 KRTAP3-1Q9BYR8 98 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 REEP1Q9H902 201 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 GRHPRQ9UBQ7 328 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 ZNF346Q9UL40 294 aaKnown RBP7.79□□□□□ -1.16
COL8A1-207ENST00000483969 MGAT4BQ9UQ53 548 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 POMPQ9Y244 141 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 USP9YO00507 2555 aaPredicted RBP7.79□□□□□ -1.16
COL8A1-207ENST00000483969 PHF3Q92576 2039 aaKnown RBP7.79□□□□□ -1.16
COL8A1-207ENST00000483969 HIVEP3Q5T1R4 2406 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 LRRK2Q5S007 2527 aa7.79□□□□□ -1.16
COL8A1-207ENST00000483969 DNAJC13O75165 2243 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 TRAV27A0A087WT01 109 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 ARPC4-TTLL3A0A0A6YYG9 625 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 DHRS12A0PJE2 317 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 ANKRD34BA5PLL1 514 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 ZNF99A8MXY4 864 aaPredicted RBP7.78□□□□□ -1.16
COL8A1-207ENST00000483969 CDC42EP2O14613 210 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 DHHO43323 396 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 AHCYL1O43865 530 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 TRMUO75648 421 aaKnown RBP7.78□□□□□ -1.16
COL8A1-207ENST00000483969 CCNB2O95067 398 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 NDUFB2O95178 105 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 CST1P01037 141 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 CD14P08571 375 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 QDPRP09417 244 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 PGA4P0DJD7 388 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 PGA3P0DJD8 388 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 NAT2P11245 290 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 ACVR1BP36896 505 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 GUCA1AP43080 201 aaPredicted RBP7.78□□□□□ -1.16
COL8A1-207ENST00000483969 ZNF84P51523 738 aa7.78□□□□□ -1.16
COL8A1-207ENST00000483969 RPL27P61353 136 aaKnown RBP7.78□□□□□ -1.16
COL8A1-207ENST00000483969 CBX1P83916 185 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms