RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SLC25A47Q6Q0C1 308 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 DPPA2Q7Z7J5 298 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 TGIF2LYQ8IUE0 185 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 SKA3Q8IX90 412 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 AQP12AQ8IXF9 295 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 IL17RDQ8NFM7 739 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 TRIM15Q9C019 465 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 SEC61A2Q9H9S3 476 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 NOX3Q9HBY0 568 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 NRIP3Q9NQ35 241 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 POU2F3Q9UKI9 436 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 FBXL3Q9UKT7 428 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 MOKQ9UQ07 419 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 UGT2A1Q9Y4X1 527 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 MED13LQ71F56 2210 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 IGKV1D-43A0A0B4J1Z2 117 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 UNC119BA6NIH7 251 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 AHCYL1O43865 530 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 ZNF14P17017 642 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-225ENST00000483506 RPL4P36578 427 aaKnown RBP15.63■□□□□ 0.09
HDAC6-225ENST00000483506 IFNGR2P38484 337 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 CAPZA2P47755 286 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 GSSP48637 474 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 ERVK-25P63136 954 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 NKX6-1P78426 367 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-225ENST00000483506 MRPS34P82930 218 aaKnown RBP15.63■□□□□ 0.09
HDAC6-225ENST00000483506 MYBPC1Q00872 1141 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 CHRNB3Q05901 458 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 FAM98BQ52LJ0 330 aaKnown RBP15.63■□□□□ 0.09
HDAC6-225ENST00000483506 AGAP6Q5VW22 663 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 C11orf71Q6IPW1 123 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 C1orf94Q6P1W5 598 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 OR4C15Q8NGM1 316 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 TMCC3Q9ULS5 477 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 ADAM18Q9Y3Q7 739 aa15.63■□□□□ 0.09
HDAC6-225ENST00000483506 IGHV2OR16-5A0A0B4J2B6 119 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 ARHGEF9O43307 516 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 OR10H3O60404 316 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 DNAJC8O75937 253 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-225ENST00000483506 FARS2O95363 451 aaKnown RBP15.62■□□□□ 0.09
HDAC6-225ENST00000483506 SLC2A10O95528 541 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 STAMBPO95630 424 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 RAP2AP10114 183 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 CD79AP11912 226 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 APEHP13798 732 aaKnown RBP15.62■□□□□ 0.09
HDAC6-225ENST00000483506 HOXB6P17509 224 aaKnown RBP15.62■□□□□ 0.09
HDAC6-225ENST00000483506 NPR2P20594 1047 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 CALCRP30988 508 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 SDHAP31040 664 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 FMODQ06828 376 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 CD47Q08722 323 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 GK3PQ14409 553 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 MESTQ5EB52 335 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 GPR139Q6DWJ6 353 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 PGBD2Q6P3X8 592 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 SMARCD3Q6STE5 483 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 THSD4Q6ZMP0 1018 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 DPY19L2P2Q6ZN68 376 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 FOXL2NBQ6ZUU3 175 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 ADGRG5Q8IZF4 528 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 MUC15Q8N387 334 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 LINC00471Q8N535 108 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 NUP37Q8NFH4 326 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 OR4F15Q8NGB8 312 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 NABP1Q96AH0 204 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 LRGUKQ96M69 825 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 Q96M85 177 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 RBP7Q96R05 134 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 KCNS3Q9BQ31 491 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 TMUB1Q9BVT8 246 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 SIAEQ9HAT2 523 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 CBLN4Q9NTU7 201 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 GRHPRQ9UBQ7 328 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 ATP23Q9Y6H3 246 aa15.62■□□□□ 0.09
HDAC6-225ENST00000483506 ACANP16112 2415 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 TNFRSF11BO00300 401 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 TXNDC12O95881 172 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 APOBEC3AP31941 199 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-225ENST00000483506 GIPRP48546 466 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 FABP6P51161 128 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 RAB1AP62820 205 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 NPRL3Q12980 569 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 TSPAN31Q12999 210 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 Q5PR19 223 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 OR2T5Q6IEZ7 315 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 ZNF770Q6IQ21 691 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-225ENST00000483506 FBXL14Q8N1E6 418 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 CLDN22Q8N7P3 220 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 WFDC11Q8NEX6 87 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 OR2T29Q8NH02 315 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 FGFBP3Q8TAT2 258 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 FANK1Q8TC84 345 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 PERPQ96FX8 193 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 ZNF570Q96NI8 536 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 SH3GL3Q99963 347 aa15.61■□□□□ 0.09
HDAC6-225ENST00000483506 SLC22A23A1A5C7 686 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 PRSS37A4D1T9 235 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 GSC2O15499 205 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 ATP5HO75947 161 aa15.6■□□□□ 0.09
HDAC6-225ENST00000483506 RAB36O95755 333 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms