RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 NPR2P20594 1047 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 GSTM3P21266 225 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 FMODQ06828 376 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 SLC25A47Q6Q0C1 308 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 SLC22A25Q6T423 547 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 ZNF620Q6ZNG0 422 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 SKA3Q8IX90 412 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 CLDN22Q8N7P3 220 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 KBTBD8Q8NFY9 601 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 OR10G2Q8NGC3 310 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 GIPC3Q8TF64 312 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 SAMD8Q96LT4 415 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 SLC38A2Q96QD8 506 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 IFT27Q9BW83 186 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 DGCR6LQ9BY27 220 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 DENND2DQ9H6A0 471 aaPredicted RBP18.23■□□□□ 0.51
SEC13-217ENST00000482647 B3GNT2Q9NY97 397 aa18.23■□□□□ 0.51
SEC13-217ENST00000482647 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.23■□□□□ 0.51
SEC13-217ENST00000482647 IGHV1-18A0A0C4DH31 117 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 SLC22A23A1A5C7 686 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 PRSS37A4D1T9 235 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 IMPA2O14732 288 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 UBL3O95164 117 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 ATE1O95260 518 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 TXNDC12O95881 172 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 IGKV3-15P01624 115 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 GUCA1AP43080 201 aaPredicted RBP18.22■□□□□ 0.51
SEC13-217ENST00000482647 IST1P53990 364 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 MRPS34P82930 218 aaKnown RBP18.22■□□□□ 0.51
SEC13-217ENST00000482647 PIGFQ07326 219 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 KRR1Q13601 381 aaKnown RBP18.22■□□□□ 0.51
SEC13-217ENST00000482647 GSG1Q2KHT4 349 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 ZNF672Q499Z4 452 aaPredicted RBP18.22■□□□□ 0.51
SEC13-217ENST00000482647 MESTQ5EB52 335 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 RASSF6Q6ZTQ3 369 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 DPPA2Q7Z7J5 298 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 ADCK1Q86TW2 530 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 MDP1Q86V88 176 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 ZNF611Q8N823 705 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 LILRB1Q8NHL6 650 aaPredicted RBP18.22■□□□□ 0.51
SEC13-217ENST00000482647 GTPBP3Q969Y2 492 aaKnown RBP18.22■□□□□ 0.51
SEC13-217ENST00000482647 RASD2Q96D21 266 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 ERMAPQ96PL5 475 aaPredicted RBP18.22■□□□□ 0.51
SEC13-217ENST00000482647 KCNS3Q9BQ31 491 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 SIAEQ9HAT2 523 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 CDH10Q9Y6N8 788 aa18.22■□□□□ 0.51
SEC13-217ENST00000482647 CREBBPQ92793 2442 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 ROS1P08922 2347 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 ZNF503-AS2A6NEH8 195 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 ARRDC5A6NEK1 342 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 SHISA9B4DS77 424 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 H7C1C5 153 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 SOCS2O14508 198 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 ARPC3O15145 178 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 IDH3BO43837 385 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 PPP1R3DO95685 299 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 IGLV1-44P01699 117 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 ARHGDIAP52565 204 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 LCN6P62502 163 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 CCNIQ14094 377 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 OR52L1Q8NGH7 329 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 NEUROG1Q92886 237 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 FBXW5Q969U6 566 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 UTP4Q969X6 686 aaKnown RBP18.21■□□□□ 0.51
SEC13-217ENST00000482647 FEVQ99581 238 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 SH3GL3Q99963 347 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 EGLN3Q9H6Z9 239 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 IL20Q9NYY1 176 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 CISD1Q9NZ45 108 aaKnown RBP18.21■□□□□ 0.51
SEC13-217ENST00000482647 PDP1Q9P0J1 537 aaPredicted RBP18.21■□□□□ 0.51
SEC13-217ENST00000482647 POU2F3Q9UKI9 436 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 FBXL3Q9UKT7 428 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 UGT2A1Q9Y4X1 527 aa18.21■□□□□ 0.51
SEC13-217ENST00000482647 CCDC168Q8NDH2 2452 aa18.21■□□□□ 0.5
SEC13-217ENST00000482647 IGKV1D-43A0A0B4J1Z2 117 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 DEAF1O75398 565 aaPredicted RBP18.2■□□□□ 0.5
SEC13-217ENST00000482647 TIPRLO75663 272 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 RAB36O95755 333 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 CRYAAP02489 173 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 CECR9P0C854 216 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 NOS3P29474 1203 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 IDH3GP51553 393 aaPredicted RBP18.2■□□□□ 0.5
SEC13-217ENST00000482647 CDH11P55287 796 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 RAB1AP62820 205 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 SPOCK1Q08629 439 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 COX10Q12887 443 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 NPRL3Q12980 569 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 SLC36A2Q495M3 483 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 SLC16A14Q7RTX9 510 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 IL17RDQ8NFM7 739 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 PIGTQ969N2 578 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 MBD6Q96DN6 1003 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 DUS3LQ96G46 650 aaKnown RBP18.2■□□□□ 0.5
SEC13-217ENST00000482647 KCNN2Q9H2S1 579 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 ARMC1Q9NVT9 282 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 ZNF224Q9NZL3 707 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 AP4S1Q9Y587 144 aa18.2■□□□□ 0.5
SEC13-217ENST00000482647 CD53P19397 219 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 CDAP32320 146 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 GIPRP48546 466 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms