RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 RPF2Q9H7B2 306 aaKnown RBP3.48□□□□□ -1.85
SF3B1-210ENST00000482158 FGF20Q9NP95 211 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-210ENST00000482158 CARMIL3Q8ND23 1372 aa3.48□□□□□ -1.85
SF3B1-210ENST00000482158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.48□□□□□ -1.85
SF3B1-210ENST00000482158 CENPJQ9HC77 1338 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-210ENST00000482158 HEATR9A2RTY3 570 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 TRIM64CA6NLI5 447 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 H0YHG0 523 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 AP3B1O00203 1094 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 KMOO15229 486 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 TLX1NBP0CAT3 122 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 MAGP20916 626 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 AQP2P41181 271 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 PRMT2P55345 433 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 HERVK_113P61574 105 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 TFDP3Q5H9I0 405 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 ZNF691Q5VV52 312 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 OR52W1Q6IF63 320 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 STRADAQ7RTN6 431 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 MREGQ8N565 214 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 SPATA4Q8NEY3 305 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 OR10R2Q8NGX6 335 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 RHEBL1Q8TAI7 183 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 DUS3LQ96G46 650 aaKnown RBP3.47□□□□□ -1.85
SF3B1-210ENST00000482158 MYCBPQ99417 103 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-210ENST00000482158 ATP5SQ99766 215 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 NUP58Q9BVL2 599 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 LHX9Q9NQ69 397 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 PRO0461Q9UI25 63 aa3.47□□□□□ -1.85
SF3B1-210ENST00000482158 ASTN1O14525 1302 aa3.46□□□□□ -1.85
SF3B1-210ENST00000482158 MN1Q10571 1320 aaPredicted RBP3.46□□□□□ -1.85
SF3B1-210ENST00000482158 A0A0B4J2A0 478 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 F6UB75 175 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 CLPXO76031 633 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 TNNI1P19237 187 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 AK4P27144 223 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-210ENST00000482158 SSR4P51571 173 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 NUTF2P61970 127 aaKnown RBP3.46□□□□□ -1.86
SF3B1-210ENST00000482158 EIF4EBP2Q13542 120 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-210ENST00000482158 XKR7Q5GH72 579 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 LY6G6FQ5SQ64 297 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 DUX4L9Q6RFH8 374 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-210ENST00000482158 ZNF493Q6ZR52 646 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 PEX26Q7Z412 305 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 PDIK1LQ8N165 341 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 EID2Q8N6I1 236 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 C15orf56Q8N910 161 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 OR56B2PQ8NGI1 322 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 ELMO1Q92556 727 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 KIFAP3Q92845 792 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 PIK3IP1Q96FE7 263 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 P2RX4Q99571 388 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 ILKAPQ9H0C8 392 aaPredicted RBP3.46□□□□□ -1.86
SF3B1-210ENST00000482158 OR51M1Q9H341 326 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 ANKRA2Q9H9E1 313 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 SLC40A1Q9NP59 571 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 NMRK1Q9NWW6 199 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 SHPKQ9UHJ6 478 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 CD84Q9UIB8 345 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 ING4Q9UNL4 249 aa3.46□□□□□ -1.86
SF3B1-210ENST00000482158 MRPS18BQ9Y676 258 aaKnown RBP3.46□□□□□ -1.86
SF3B1-210ENST00000482158 MYO10Q9HD67 2058 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 CIB4A0PJX0 185 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 DLGAP1O14490 977 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 ANGPTL7O43827 346 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 CLIC3O95833 236 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 GNAO1P09471 354 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 ZNF823P16415 610 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 GDI1P31150 447 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 ACLYP53396 1101 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 CDH6P55285 790 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 YWHAGP61981 247 aaKnown RBP eCLIP3.45□□□□□ -1.86
SF3B1-210ENST00000482158 ACTA2P62736 377 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 ACTG2P63267 376 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 ACTC1P68032 377 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 ACTA1P68133 377 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 POU2AF1Q16633 256 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 TMEM179Q6ZVK1 233 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 SAXO1Q8IYX7 474 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 CXorf40AQ8TE69 158 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 CCDC77Q9BR77 488 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 CHAC1Q9BUX1 264 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 IFI27L2Q9H2X8 130 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 PSG11Q9UQ72 335 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 PSG8Q9UQ74 426 aa3.45□□□□□ -1.86
SF3B1-210ENST00000482158 CAMTA1Q9Y6Y1 1673 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 CCDC169A6NNP5 214 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 DYNC1I1O14576 645 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 RAB29O14966 203 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 EEDO75530 441 aaKnown RBP3.44□□□□□ -1.86
SF3B1-210ENST00000482158 CIB2O75838 187 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 AIFM1O95831 613 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 PABPC4LP0CB38 370 aaKnown RBP3.44□□□□□ -1.86
SF3B1-210ENST00000482158 UBE2AP49459 152 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 ECH1Q13011 328 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 PPP1R7Q15435 360 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 DEFB116Q30KQ4 102 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 PRAMEF20Q5VT98 475 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 SLC8B1Q6J4K2 584 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 ANKRD26P1Q6NSI1 321 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms