RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TRBV2A0A0J9YWF9 115 aa13□□□□□ -0.33
CHD3-211ENST00000481999 ANKRD61A6NGH8 418 aa13□□□□□ -0.33
CHD3-211ENST00000481999 ZNF879B4DU55 563 aa13□□□□□ -0.33
CHD3-211ENST00000481999 CDX4O14627 284 aaPredicted RBP13□□□□□ -0.33
CHD3-211ENST00000481999 GPRIN2O60269 458 aa13□□□□□ -0.33
CHD3-211ENST00000481999 ZFAND5O76080 213 aa13□□□□□ -0.33
CHD3-211ENST00000481999 HIST1H2ABP04908 130 aa13□□□□□ -0.33
CHD3-211ENST00000481999 SRP9P49458 86 aaKnown RBP13□□□□□ -0.33
CHD3-211ENST00000481999 GNG2P59768 71 aa13□□□□□ -0.33
CHD3-211ENST00000481999 MC2RQ01718 297 aa13□□□□□ -0.33
CHD3-211ENST00000481999 ISXQ2M1V0 245 aa13□□□□□ -0.33
CHD3-211ENST00000481999 CREB3L2Q70SY1 520 aa13□□□□□ -0.33
CHD3-211ENST00000481999 HIST3H2AQ7L7L0 130 aa13□□□□□ -0.33
CHD3-211ENST00000481999 TIPARPQ7Z3E1 657 aaKnown RBP13□□□□□ -0.33
CHD3-211ENST00000481999 GRINAQ7Z429 371 aa13□□□□□ -0.33
CHD3-211ENST00000481999 LIPHQ8WWY8 451 aa13□□□□□ -0.33
CHD3-211ENST00000481999 HIST1H2ACQ93077 130 aa13□□□□□ -0.33
CHD3-211ENST00000481999 TSPAN10Q9H1Z9 355 aaPredicted RBP13□□□□□ -0.33
CHD3-211ENST00000481999 METTL7AQ9H8H3 244 aa13□□□□□ -0.33
CHD3-211ENST00000481999 MRPL39Q9NYK5 338 aaKnown RBP13□□□□□ -0.33
CHD3-211ENST00000481999 NCDNQ9UBB6 729 aa13□□□□□ -0.33
CHD3-211ENST00000481999 CAMK2AQ9UQM7 478 aa13□□□□□ -0.33
CHD3-211ENST00000481999 RIF1Q5UIP0 2472 aaKnown RBP13□□□□□ -0.33
CHD3-211ENST00000481999 RTTNQ86VV8 2226 aa13□□□□□ -0.33
CHD3-211ENST00000481999 IGHV1-45A0A0A0MS14 117 aa13□□□□□ -0.33
CHD3-211ENST00000481999 CD3GP09693 182 aa13□□□□□ -0.33
CHD3-211ENST00000481999 COX6A1P12074 109 aa13□□□□□ -0.33
CHD3-211ENST00000481999 EDNRAP25101 427 aa13□□□□□ -0.33
CHD3-211ENST00000481999 STOMP27105 288 aa13□□□□□ -0.33
CHD3-211ENST00000481999 RPS11P62280 158 aaKnown RBP eCLIP13□□□□□ -0.33
CHD3-211ENST00000481999 HSF2Q03933 536 aa13□□□□□ -0.33
CHD3-211ENST00000481999 OR7A5Q15622 319 aa13□□□□□ -0.33
CHD3-211ENST00000481999 ACKR1Q16570 336 aa13□□□□□ -0.33
CHD3-211ENST00000481999 HSD17B12Q53GQ0 312 aa13□□□□□ -0.33
CHD3-211ENST00000481999 FAM69AQ5T7M9 428 aa13□□□□□ -0.33
CHD3-211ENST00000481999 CMTM3Q96MX0 182 aa13□□□□□ -0.33
CHD3-211ENST00000481999 ZFP3Q96NJ6 502 aa13□□□□□ -0.33
CHD3-211ENST00000481999 C7orf50Q9BRJ6 194 aaKnown RBP13□□□□□ -0.33
CHD3-211ENST00000481999 GHITMQ9H3K2 345 aa13□□□□□ -0.33
CHD3-211ENST00000481999 FKRPQ9H9S5 495 aa13□□□□□ -0.33
CHD3-211ENST00000481999 ZNF160Q9HCG1 818 aa13□□□□□ -0.33
CHD3-211ENST00000481999 PISDQ9UG56 409 aa13□□□□□ -0.33
CHD3-211ENST00000481999 SPATA2Q9UM82 520 aa13□□□□□ -0.33
CHD3-211ENST00000481999 CLEC4AQ9UMR7 237 aa13□□□□□ -0.33
CHD3-211ENST00000481999 HSPB11Q9Y547 144 aa13□□□□□ -0.33
CHD3-211ENST00000481999 TRAV6A0A075B6T7 132 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 SMLR1H3BR10 107 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 STK17BO94768 372 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 RPP14O95059 124 aaKnown RBP12.99□□□□□ -0.33
CHD3-211ENST00000481999 ONECUT2O95948 504 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 TCRBP04435 133 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 KLK2P20151 261 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 ACP1P24666 158 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 C17orf67Q0P5P2 114 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 SNTA1Q13424 505 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 FCN2Q15485 313 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 ZNF468Q5VIY5 522 aaPredicted RBP12.99□□□□□ -0.33
CHD3-211ENST00000481999 FAM205BPQ63HN1 556 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 LAMTOR1Q6IAA8 161 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 LRRC69Q6ZNQ3 347 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 ZNF767PQ75MW2 155 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 SIAH3Q8IW03 269 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 EXD3Q8N9H8 876 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 ELP5Q8TE02 316 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 PHF21AQ96BD5 680 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 OR14A2Q96R54 314 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 AMELYQ99218 206 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 RABL2AQ9UBK7 228 aaPredicted RBP12.99□□□□□ -0.33
CHD3-211ENST00000481999 RABL2BQ9UNT1 228 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 MRPS7Q9Y2R9 242 aaKnown RBP12.99□□□□□ -0.33
CHD3-211ENST00000481999 LOXL2Q9Y4K0 774 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 AKR7A3O95154 331 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 F10P00742 488 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 NANOS3P60323 173 aaKnown RBP12.99□□□□□ -0.33
CHD3-211ENST00000481999 DGCR2P98153 550 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 IL10RAQ13651 578 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 MEP1BQ16820 701 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 ZNF671Q8TAW3 534 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 OR2M2Q96R28 347 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 CMKLR1Q99788 373 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 CACNG6Q9BXT2 260 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 PPP4R1LQ9P1A2 415 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 ING4Q9UNL4 249 aa12.99□□□□□ -0.33
CHD3-211ENST00000481999 RPH3AQ9Y2J0 694 aaPredicted RBP12.99□□□□□ -0.33
CHD3-211ENST00000481999 PCSK5Q92824 1860 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 A0A0B4J203 849 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 A8MVM7 634 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 CTDSPLO15194 276 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 AKR7A2O43488 359 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 GSTZ1O43708 216 aaPredicted RBP12.98□□□□□ -0.33
CHD3-211ENST00000481999 OR8G3PP0DMU2 310 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 CCKBRP32239 447 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 CENPAP49450 140 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 ODF4Q2M2E3 257 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 UNQ9370/PRO34162Q6UXP9 181 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 DPY19L4Q7Z388 723 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 OR11G2Q8NGC1 345 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 ADAMTS14Q8WXS8 1223 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 CCNL2Q96S94 520 aaPredicted RBP12.98□□□□□ -0.33
CHD3-211ENST00000481999 EMC7Q9NPA0 242 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms