RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 RPL4P36578 427 aaKnown RBP13.25□□□□□ -0.29
CDK9-203ENST00000480353 SEC24CP53992 1094 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 CTXN1P60606 82 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDK9-203ENST00000480353 KRT72Q14CN4 511 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 SGCAQ16586 387 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 CYB5R2Q6BCY4 276 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 TREML1Q86YW5 311 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 NRMQ8IXM6 262 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 RNF113BQ8IZP6 322 aaKnown RBP13.25□□□□□ -0.29
CDK9-203ENST00000480353 ICA1LQ8NDH6 482 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 SLC30A7Q8NEW0 376 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 OR51A7Q8NH64 312 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 LIPHQ8WWY8 451 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 NSMAFQ92636 917 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 MRPL24Q96A35 216 aaKnown RBP13.25□□□□□ -0.29
CDK9-203ENST00000480353 SYT3Q9BQG1 590 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 SPAG4Q9NPE6 437 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 KRCC1Q9NPI7 259 aaPredicted RBP13.25□□□□□ -0.29
CDK9-203ENST00000480353 GMPR2Q9P2T1 348 aaKnown RBP13.25□□□□□ -0.29
CDK9-203ENST00000480353 DUSP13Q9UII6 198 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 GPR160Q9UJ42 338 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 HIF3AQ9Y2N7 669 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 TLN2Q9Y4G6 2542 aa13.25□□□□□ -0.29
CDK9-203ENST00000480353 ABCA1O95477 2261 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 M0R233 179 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 SYNGR3O43761 229 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 MGRN1O60291 552 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 CRLF1O75462 422 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 ZNF35P13682 527 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 DAOP14920 347 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 NCK1P16333 377 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 SLC9A3P48764 834 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 RPL27P61353 136 aaKnown RBP13.24□□□□□ -0.29
CDK9-203ENST00000480353 MXRA7P84157 204 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 RUNX1T1Q06455 604 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 KRTAP1-1Q07627 177 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 ANKDD1AQ495B1 522 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 NRN1LQ496H8 165 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 FAM205BPQ63HN1 556 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 RGS7BPQ6MZT1 257 aaPredicted RBP13.24□□□□□ -0.29
CDK9-203ENST00000480353 FNDC8Q8TC99 324 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 ACOT11Q8WXI4 607 aaPredicted RBP13.24□□□□□ -0.29
CDK9-203ENST00000480353 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 DOK1Q99704 481 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 OR51B6Q9H340 312 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 TPK1Q9H3S4 243 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 MS4A5Q9H3V2 200 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 ZNF224Q9NZL3 707 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 REV1Q9UBZ9 1251 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 EGFL7Q9UHF1 273 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 FZR1Q9UM11 496 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 SAMD4AQ9UPU9 718 aaKnown RBP13.24□□□□□ -0.29
CDK9-203ENST00000480353 SNX13Q9Y5W8 968 aa13.24□□□□□ -0.29
CDK9-203ENST00000480353 TRAV27A0A087WT01 109 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 A6NIZ1 184 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 NPIPB13A6NJU9 1138 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 NPIPB4C9JG80 1138 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 XKRYO14609 159 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 SLC2A10O95528 541 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 LCKP06239 509 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 FAM157BP0CG42 384 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 APEHP13798 732 aaKnown RBP13.23□□□□□ -0.29
CDK9-203ENST00000480353 CCNOP22674 350 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 RAD52P43351 418 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 NR4A2P43354 598 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 EVX1P49640 407 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 GZMKP49863 264 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 RAP1BP61224 184 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 RAP1AP62834 184 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 GNGT1P63211 74 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 VLDLRP98155 873 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 PRKCDQ05655 676 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 HIST3H3Q16695 136 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 NKPD1Q17RQ9 610 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 CHRFAM7AQ494W8 412 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 FGD3Q5JSP0 725 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 ARMC4Q5T2S8 1044 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 GLYATQ6IB77 296 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 UNQ6126/PRO20091Q6UXV3 157 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 IGFN1Q86VF2 1251 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 UBASH3BQ8TF42 649 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 SNX33Q8WV41 574 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 FOXN4Q96NZ1 517 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 ALG12Q9BV10 488 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 MRPL13Q9BYD1 178 aaKnown RBP13.23□□□□□ -0.29
CDK9-203ENST00000480353 MRPL37Q9BZE1 423 aaKnown RBP13.23□□□□□ -0.29
CDK9-203ENST00000480353 SIAEQ9HAT2 523 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 SMURF2Q9HAU4 748 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 GRHPRQ9UBQ7 328 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 ZNF346Q9UL40 294 aaKnown RBP13.23□□□□□ -0.29
CDK9-203ENST00000480353 TMEM5Q9Y2B1 443 aa13.23□□□□□ -0.29
CDK9-203ENST00000480353 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
CDK9-203ENST00000480353 YLPM1P49750 1951 aaKnown RBP13.22□□□□□ -0.29
CDK9-203ENST00000480353 A0A1W2PPL8 197 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 SNX3O60493 162 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 IFNA2P01563 188 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 CCL2P13500 99 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 MAKP20794 623 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 CDAP32320 146 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms