RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 NELFAQ9H3P2 528 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 GPR35Q9HC97 309 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 FKBP14Q9NWM8 211 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 MRPL22Q9NWU5 206 aaKnown RBP11.55□□□□□ -0.56
CHD3-210ENST00000479080 COA3Q9Y2R0 106 aaPredicted RBP11.55□□□□□ -0.56
CHD3-210ENST00000479080 POLEQ07864 2286 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 ZGRF1Q86YA3 2104 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 ARHGAP21Q5T5U3 1957 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 TVP23AA6NH52 213 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 DHHO43323 396 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 AHCYL1O43865 530 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 MPZL2O60487 215 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 SMNDC1O75940 238 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHD3-210ENST00000479080 APOL3O95236 402 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 TFP02787 698 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 CRHP06850 196 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 ITGA5P08648 1049 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 HTR1AP08908 422 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 DBTP11182 482 aaKnown RBP11.54□□□□□ -0.56
CHD3-210ENST00000479080 HTR1FP30939 366 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 CDAP32320 146 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 CDH11P55287 796 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 MVKQ03426 396 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 DOC2BQ14184 412 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 SF3B4Q15427 424 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHD3-210ENST00000479080 CDSNQ15517 529 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 EIF2S3LQ2VIR3 472 aaKnown RBP11.54□□□□□ -0.56
CHD3-210ENST00000479080 KLHL12Q53G59 568 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 OR2A2Q6IF42 318 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 MEPCEQ7L2J0 689 aaKnown RBP11.54□□□□□ -0.56
CHD3-210ENST00000479080 SHFQ7M4L6 423 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 HDDC2Q7Z4H3 204 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 CNEP1R1Q8N9A8 125 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 ZNF511Q8NB15 262 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 OR6N1Q8NGY5 312 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 SMAP2Q8WU79 429 aaPredicted RBP11.54□□□□□ -0.56
CHD3-210ENST00000479080 NSMAFQ92636 917 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 GGHQ92820 318 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 APH1AQ96BI3 265 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 OTULINQ96BN8 352 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 SIGLEC11Q96RL6 698 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 TEAD3Q99594 435 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 TEX12Q9BXU0 123 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 ULBP2Q9BZM5 246 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 Q9H521 79 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 MARCH7Q9H992 704 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 PLSCR4Q9NRQ2 329 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 PLCXD1Q9NUJ7 323 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 MALT1Q9UDY8 824 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 EMC9Q9Y3B6 208 aa11.54□□□□□ -0.56
CHD3-210ENST00000479080 TRIM64A6NGJ6 449 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 PRR32B1ATL7 298 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 RPL36A-HNRNPH2H7BZ11 118 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 J3QRE1 110 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 SELENOFO60613 162 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 KHDRBS3O75525 346 aaKnown RBP11.53□□□□□ -0.56
CHD3-210ENST00000479080 SEC14L2O76054 403 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 GLCEO94923 617 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 IL18BPO95998 194 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 WNT11O96014 354 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 IL2RAP01589 272 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 CRHBPP24387 322 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 CTSSP25774 331 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 ROR2Q01974 943 aaKnown RBP11.53□□□□□ -0.56
CHD3-210ENST00000479080 PIGFQ07326 219 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 GGTLC2Q14390 218 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 MEP1BQ16820 701 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 CEACAM16Q2WEN9 425 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 THEM4Q5T1C6 240 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 MEDAGQ5VYS4 303 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 KRT80Q6KB66 452 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 ZNF474Q6S9Z5 364 aaPredicted RBP11.53□□□□□ -0.56
CHD3-210ENST00000479080 TIGD4Q8IY51 512 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 GABRG1Q8N1C3 465 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 ZNF786Q8N393 782 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 RFLNBQ8N5W9 214 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 ZNF610Q8N9Z0 462 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 BPIFB6Q8NFQ5 453 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 SLC26A10Q8NG04 563 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 OR2T4Q8NH00 348 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 LGALS12Q96DT0 336 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 ZFP3Q96NJ6 502 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 RERGLQ9H628 205 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 WDR76Q9H967 626 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 ADGRL4Q9HBW9 690 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 CRLF2Q9HC73 371 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 MRPS18AQ9NVS2 196 aaKnown RBP11.53□□□□□ -0.56
CHD3-210ENST00000479080 CLN6Q9NWW5 311 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 PSORS1C1Q9UIG5 152 aa11.53□□□□□ -0.56
CHD3-210ENST00000479080 PHF3Q92576 2039 aaKnown RBP11.52□□□□□ -0.56
CHD3-210ENST00000479080 SH3D21A4FU49 640 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 MRPL3P09001 348 aaKnown RBP11.52□□□□□ -0.57
CHD3-210ENST00000479080 CD8BP10966 210 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 PAICSP22234 425 aaKnown RBP11.52□□□□□ -0.57
CHD3-210ENST00000479080 IGHV1-2P23083 117 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 RPS27P42677 84 aaKnown RBP11.52□□□□□ -0.57
CHD3-210ENST00000479080 PER3P56645 1201 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 CXCR4P61073 352 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 SLC35A2P78381 396 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 SLC35D3Q5M8T2 416 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms