RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 NR1H2P55055 460 aa25.87■■□□□ 1.73
HOXB3-208ENST00000476342 SLC36A3Q495N2 470 aa25.87■■□□□ 1.73
HOXB3-208ENST00000476342 OR2T33Q8NG76 320 aa25.87■■□□□ 1.73
HOXB3-208ENST00000476342 MOV10Q9HCE1 1003 aaKnown RBP25.87■■□□□ 1.73
HOXB3-208ENST00000476342 RASSF1Q9NS23 344 aa25.87■■□□□ 1.73
HOXB3-208ENST00000476342 TMEM38BQ9NVV0 291 aa25.87■■□□□ 1.73
HOXB3-208ENST00000476342 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP25.86■■□□□ 1.73
HOXB3-208ENST00000476342 BHLHE40O14503 412 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 FARS2O95363 451 aaKnown RBP25.86■■□□□ 1.73
HOXB3-208ENST00000476342 TP53P04637 393 aaPredicted RBP25.86■■□□□ 1.73
HOXB3-208ENST00000476342 NRN1LQ496H8 165 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 FAHD1Q6P587 224 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 SLC25A47Q6Q0C1 308 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 SEZ6L2Q6UXD5 910 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 ICA1LQ8NDH6 482 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 NANOS1Q8WY41 292 aaKnown RBP25.86■■□□□ 1.73
HOXB3-208ENST00000476342 NSMAFQ92636 917 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 PIK3IP1Q96FE7 263 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 PKP2Q99959 881 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 GABARAPL1Q9H0R8 117 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 ESRP2Q9H6T0 727 aaKnown RBP25.86■■□□□ 1.73
HOXB3-208ENST00000476342 VSX1Q9NZR4 365 aaPredicted RBP25.86■■□□□ 1.73
HOXB3-208ENST00000476342 REV1Q9UBZ9 1251 aa25.86■■□□□ 1.73
HOXB3-208ENST00000476342 ANKRD65E5RJM6 399 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 OR8G3PP0DMU2 310 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 OSMP13725 252 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 PRF1P14222 555 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 GUCA1AP43080 201 aaPredicted RBP25.85■■□□□ 1.73
HOXB3-208ENST00000476342 CAPZA2P47755 286 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 PTCHD4Q6ZW05 846 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 PLPPR2Q96GM1 343 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 SNX18Q96RF0 628 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 SYT4Q9H2B2 425 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 PAPOLBQ9NRJ5 636 aaKnown RBP25.85■■□□□ 1.73
HOXB3-208ENST00000476342 OAZ3Q9UMX2 235 aa25.85■■□□□ 1.73
HOXB3-208ENST00000476342 ABCA4P78363 2273 aa25.84■■□□□ 1.73
HOXB3-208ENST00000476342 IGKV1D-43A0A0B4J1Z2 117 aa25.84■■□□□ 1.73
HOXB3-208ENST00000476342 SIAH2O43255 324 aa25.84■■□□□ 1.73
HOXB3-208ENST00000476342 HRGP04196 525 aa25.84■■□□□ 1.73
HOXB3-208ENST00000476342 IGFBP1P08833 259 aaPredicted RBP25.84■■□□□ 1.73
HOXB3-208ENST00000476342 HIST1H1CP16403 213 aaKnown RBP25.84■■□□□ 1.73
HOXB3-208ENST00000476342 DAPP51397 102 aa25.84■■□□□ 1.73
HOXB3-208ENST00000476342 LNX2Q8N448 690 aa25.84■■□□□ 1.73
HOXB3-208ENST00000476342 SLC22A24Q8N4F4 322 aa25.84■■□□□ 1.73
HOXB3-208ENST00000476342 OR4K13Q8NH42 304 aa25.84■■□□□ 1.73
HOXB3-208ENST00000476342 CLEC4MQ9H2X3 399 aaPredicted RBP25.84■■□□□ 1.73
HOXB3-208ENST00000476342 NPAP1Q9NZP6 1156 aa25.84■■□□□ 1.73
HOXB3-208ENST00000476342 MGRN1O60291 552 aa25.83■■□□□ 1.73
HOXB3-208ENST00000476342 RENP00797 406 aa25.83■■□□□ 1.73
HOXB3-208ENST00000476342 NPR2P20594 1047 aa25.83■■□□□ 1.73
HOXB3-208ENST00000476342 CDKN2AP42771 156 aaKnown RBP25.83■■□□□ 1.73
HOXB3-208ENST00000476342 SLC35F1Q5T1Q4 408 aa25.83■■□□□ 1.73
HOXB3-208ENST00000476342 LEG1Q6P5S2 330 aa25.83■■□□□ 1.73
HOXB3-208ENST00000476342 SETXQ7Z333 2677 aaKnown RBP25.82■■□□□ 1.72
HOXB3-208ENST00000476342 POU1F1P28069 291 aa25.82■■□□□ 1.72
HOXB3-208ENST00000476342 ZNF83P51522 516 aa25.82■■□□□ 1.72
HOXB3-208ENST00000476342 MRPS34P82930 218 aaKnown RBP25.82■■□□□ 1.72
HOXB3-208ENST00000476342 DNM1P34Q6PK57 102 aa25.82■■□□□ 1.72
HOXB3-208ENST00000476342 TMEM108Q6UXF1 575 aa25.82■■□□□ 1.72
HOXB3-208ENST00000476342 PARP8Q8N3A8 854 aa25.82■■□□□ 1.72
HOXB3-208ENST00000476342 NMNAT3Q96T66 252 aa25.82■■□□□ 1.72
HOXB3-208ENST00000476342 OSBPL10Q9BXB5 764 aa25.82■■□□□ 1.72
HOXB3-208ENST00000476342 KRT84Q9NSB2 600 aa25.82■■□□□ 1.72
HOXB3-208ENST00000476342 CACNA1DQ01668 2161 aa25.82■■□□□ 1.72
HOXB3-208ENST00000476342 SAC3D1A6NKF1 404 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 SLC16A7O60669 478 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 CRABP1P29762 137 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 TUBA1BP68363 451 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 TUBA4AP68366 448 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 KHDRBS1Q07666 443 aaKnown RBP eCLIP25.81■■□□□ 1.72
HOXB3-208ENST00000476342 NCMAPQ5T1S8 102 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 SLC27A4Q6P1M0 643 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 TUBA1AQ71U36 451 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 SDR9C7Q8NEX9 313 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 OR52E2Q8NGJ4 325 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 C1QTNF6Q9BXI9 259 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 SIAEQ9HAT2 523 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 UGT2A1Q9Y4X1 527 aa25.81■■□□□ 1.72
HOXB3-208ENST00000476342 UBL3O95164 117 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 CTLA4P16410 223 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 PTAFRP25105 342 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 PGGHGQ32M88 737 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 OR4Q3Q8NH05 313 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 SEC61A2Q9H9S3 476 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 ENOPH1Q9UHY7 261 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 KLHL21Q9UJP4 597 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 A0A1W2PPL8 197 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 M0R1B8 84 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 KHDRBS3O75525 346 aaKnown RBP25.8■■□□□ 1.72
HOXB3-208ENST00000476342 IFNGP01579 166 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 CD3EP07766 207 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 CD79AP11912 226 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 CDAP32320 146 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 BSPH1Q075Z2 132 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 GSG1Q2KHT4 349 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 KDM4DQ6B0I6 523 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 SLC16A14Q7RTX9 510 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 DPPA2Q7Z7J5 298 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 PQLC1Q8N2U9 271 aa25.8■■□□□ 1.72
HOXB3-208ENST00000476342 FAM169BQ8N8A8 192 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms